Xanthomonas sacchari: SB85_05590
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Entry
SB85_05590 CDS
T03566
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xsa03016
]
SB85_05590 (truB)
Enzymes [BR:
xsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SB85_05590 (truB)
Transfer RNA biogenesis [BR:
xsa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SB85_05590 (truB)
Prokaryotic type
SB85_05590 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AJC45305
LinkDB
All DBs
Position
complement(1380955..1381881)
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AA seq
308 aa
AA seq
DB search
MPVFGPRLPRIVFRRLDGIVLLDKPIGMSSNAALQAARRLFRAEKGGHTGSLDPLATGLL
PLCFGEATKLAGLLLGSAKAYEAEVVLGVTTDSDDAEGAVLRTRPVPPLDAATLEAALAP
LRGRIRQRAPIYSALKQGGEPLYVKARRGEAIEAPEREVEVHAIDVLAHAGDRLRLHVAC
GSGTYIRSLARDLGEALGCGAHIAALRRLWVEPFRNPQMVTLEHLQHLAAQDPAALEALV
LPLAAGLADFPPLRLEHAAAQRFRMGQRLRDPAWAPGLAAVFDADGVPLGLGQVDASGLL
APQRMFNP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttcggcccgcgcctgcctcgtatcgtcttccgtcgcctcgacggcatcgtg
ctgctcgacaagccgatcggcatgagttccaacgcggcgctgcaggcggcgcggcggctg
ttccgtgcggagaagggcggtcacaccggcagcctggatccgctcgccaccggcctgctg
ccgctgtgcttcggcgaggcgaccaagctggccgggctgctgctcgggtcggccaaggcc
tacgaagcggaggtcgtgctcggcgtcaccaccgacagcgacgatgccgagggcgcggtg
ctgcgcacccggccggtgccgccgctggacgcagcgaccctggaggcggcgctggcaccg
ctgcgcgggcgtatccgccagcgcgcgccgatctactcggcgctcaagcagggcggcgag
ccgctgtacgtcaaggcgcgccgcggcgaggcgatcgaggcgccggagcgcgaggtcgag
gtgcatgcgatcgacgtgctcgcccacgccggcgaccgcctgcgtctgcacgtggcctgc
ggatccggcacctatatccgcagcctggcccgcgacctgggcgaggcgctgggctgcggc
gcacatatcgccgcgttgcggcggctgtgggtggaaccgttccgcaacccgcagatggtc
accctggagcacctgcagcacctggccgcgcaggatccggcggcgctggaggcgctggtg
ctgccgctggccgccggcctggccgatttcccgccgctgcgcctggagcatgctgcggcg
cagcgcttccgcatgggccagcgcctgcgcgatccggcctgggcgcccggcctggcggcg
gtgttcgacgccgacggcgtcccgctgggcctgggccaggtggatgcgagcgggctgctg
gcgccgcagcgcatgttcaatccgtga
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integrated database retrieval system
