Xanthomonas sacchari: SB85_06550
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Entry
SB85_06550 CDS
T03566
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SB85_06550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xsa03019
]
SB85_06550
03009 Ribosome biogenesis [BR:
xsa03009
]
SB85_06550
03036 Chromosome and associated proteins [BR:
xsa03036
]
SB85_06550
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SB85_06550
Messenger RNA biogenesis [BR:
xsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SB85_06550
Ribosome biogenesis [BR:
xsa03009
]
Eukaryotic type
90S particles
RNase
SB85_06550
Prokaryotic type
rRNA processing factors
SB85_06550
Chromosome and associated proteins [BR:
xsa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SB85_06550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Orthopox_F8
Motif
Other DBs
NCBI-ProteinID:
AJC47532
LinkDB
All DBs
Position
complement(1598664..1599344)
Genome browser
AA seq
226 aa
AA seq
DB search
MASKTILRGDRIGHRFAEPQLLAQALTHRSAGAPHNERLEFLGDGIVNLLIAEALYQRWP
KADEGALTRARAELVREASLAAIGRQLELGERLTLGPGEMKSGGHRRDSILADAVEAVVA
AIYLDAGFETCRATILPWFEAALAALPVGKVEKDAKTRLQEWLQARQRTLPAYELISETG
DDHAKLFRVRCVLAEPALVTEGEGTSRRLAEQQAAAAAIEQLDSSK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtggccagtaagaccatcctgcgcggtgaccgcatcggtcaccgcttcgccgagccgcag
ttgctggcgcaggcgctgacccaccgcagtgccggcgcgccgcacaacgaacgtctggaa
ttcctcggcgacggcatcgtcaacctgctgatcgccgaggcgctgtaccagcgctggccc
aaggccgacgagggcgcgctgacccgcgcccgcgccgagctggtgcgcgaggcgtcgctg
gccgcgatcggccggcaactggaactgggcgaacgcctgaccctgggcccgggcgagatg
aagtccggcggccatcgtcgcgactcgatcctggccgatgcggtggaggcggtggttgcg
gcgatctacctggacgccggcttcgagacctgccgcgccaccatcctgccctggttcgag
gccgcgctggcggcgctgccggtgggcaaggtggagaaggacgccaagacccgcctgcag
gaatggctgcaggcccggcagcggaccctgccggcctacgaactgatcagcgagaccggc
gacgaccacgccaagctattccgggtacgctgcgtactcgccgagcccgccctggtgacc
gagggcgagggcacctcgcggcgcctggccgaacagcaggccgccgccgccgccatcgag
caactggattcgagcaagtga
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