Xanthomonas sacchari: SB85_07930
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Entry
SB85_07930 CDS
T03566
Name
(GenBank) membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xsa02000
]
SB85_07930
Transporters [BR:
xsa02000
]
Other transporters
Pores ion channels [TC:
1
]
SB85_07930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
DUF481
DUF748
Autotransporter
SlipAM
DUF3575
TSP_3
Motif
Other DBs
NCBI-ProteinID:
AJC45710
LinkDB
All DBs
Position
complement(1918579..1919676)
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AA seq
365 aa
AA seq
DB search
MNKKILTAALLGGLAVAQAASAQEFDDRWYLTGSAGFNFQDKDRTTNDAPFVTLGLGKFI
NPNWSLDGELNYQNPNFDKNQDLNWSQYGVSVDLRRHFIQEGRGWNPYLLFGLGYQRSEE
EFDTGGPVSPGQRKDGNFAAKAGVGLQTTFDKRVAVRAEVAYRADFDDKSVAAPSENWFG
DVLASVGVVIPLGPPPAAPVAPPPPPAAAPSCADLDDDGDGVNNCDDKCPNSQPGQTIGP
DGCPVPVSIDLKGVNFDFNKANLRPDAVAILGEATEILKRYPDLRVEVAGHTDSKGTEAY
NQKLSERRARVVYDYLVKNGVDASRLVGPIGYGESRPIAPNTNPDGSDNPEGRAKNRRTE
LNVQN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaattctcaccgccgcgttgctgggcggtctggccgtcgcccaggcagcg
tccgcgcaggaattcgacgaccgctggtacctgaccggttcggctggtttcaacttccag
gacaaggaccgcaccaccaacgacgctccgttcgtcaccctgggcctcggcaagttcatc
aaccccaactggtcgctggacggtgagctgaactatcagaacccgaacttcgacaagaac
caggacctgaactggagccagtacggcgtctcggtcgacctgcgtcgccacttcatccag
gaaggccgcggctggaacccgtacctgctgttcggcctgggctaccagcgctcggaagaa
gagttcgacaccggcggtccggtctccccgggccagcgcaaggacggcaacttcgccgcc
aaggccggcgtcggcctgcagaccaccttcgacaagcgcgtcgccgtgcgtgccgaagtg
gcctaccgcgctgacttcgatgacaagagcgttgctgctccgtccgagaactggttcggc
gacgtgctggcttcggtcggcgtcgtgatcccgctgggcccgccgccggccgccccggtc
gccccgccgccgccgccggccgctgcgccgagctgcgccgacctggacgacgacggtgac
ggcgtcaacaactgcgacgacaagtgcccgaactcccagcctggccagaccatcggtccg
gacggctgcccggtgccggtgtcgatcgacctgaagggcgtcaacttcgacttcaacaag
gcgaacctgcgtccggacgccgtggcgatcctgggcgaggccaccgagatcctgaagcgc
taccccgacctgcgcgtcgaggttgccggtcacaccgactcgaagggcaccgaagcctac
aaccagaagctgtccgagcgccgcgcccgcgtcgtgtacgactacctggtgaagaacggc
gtggacgcgtcgcgtctggtcggcccgatcggctacggcgagagccgtccgattgcgccg
aacaccaacccggatggttcggacaatccggaaggccgcgccaagaaccgtcgtaccgag
ctgaacgtccagaactaa
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