Xanthomonas sacchari: SB85_09465
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Entry
SB85_09465 CDS
T03566
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xsa02000
]
SB85_09465
Transporters [BR:
xsa02000
]
Other transporters
Pores ion channels [TC:
1
]
SB85_09465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
Motif
Other DBs
NCBI-ProteinID:
AJC47564
LinkDB
All DBs
Position
complement(2256956..2262928)
Genome browser
AA seq
1990 aa
AA seq
DB search
MNALASGTDSVAVGGVSTAAASAGNSVGIAAATGVGGIALGAGAQSQSDYAIALGYNANV
FPNLPGNVDSVAIGHSAGSFAPRTVSLGSYALASGDSGIALGYKAIAWNPDSVALGARAV
TSTYHSNGTALGTDSQANGSDATAIGYGARVSTWLDDARNQAPTNAVALGAHSYAARDNS
VSVGDVANGLTRQITSVAAGTEATDAVNVAQLQEAGKYLQASAGNSDAGAYVEGDDALAA
GEAANAIGNGSTALGAGADALNSGATAVGSGAVAAGQNSAAFGTNAQATGPAAVAVGGVA
VDANGEPLITKSGVAVETGATSAGVGGTALGASADASGFAASAVGVGAYAGGAQASAFGA
VANATGDYATAVGTQSAATGTSSVAVGGPADLIPGLGLFVQTQASGANAAAFGAGAIASG
DESTASGSMTEASGLQSTALGYFAYAPGDHASALGAQSWASGANSTALGYYSTAFAADSV
ALGANSVARRANTVSVGDAGSERQVVNVAAGTQSTDAVNLAQLDAVRATAEGTSKFFAHG
GAGTVGAYADGDGALAAGDAANAYGSGAAAFGSGAAAMGDDAVALGNGSTAGGTGGTAIG
GRGQAYDQYNQPIVDADGKPVLVGANAGENATALGAGAQATGSVATATGYGAQATGDHST
AGGYKARATGNYSLAQGDNAWASGEDASAVGAYAWATADGASAFGTSAWATGTNASAFGT
GAWASGSGATSIGFNSWAPGLSATAVGRGAFGYGNYSVALGFQALGNQVNTIAIGTNTVA
DAESAISIGAGSEATAANAVALGAGAVADRAYSVSVGSAGQERQITNVAAGTEATDAVNV
AQLDAVKQAAAATSKYFQASGSADSDAGALVDGDNALAAGEAANATADGATALGGGANAV
AAGATAIGFNAVSSGVDAVALGNASQASGENSIAIGSNAQASEIGATASGAGAQASGTYA
TATGNEAVASDNQATATGFRSAASGIGATALGGYSEATGYLSSALGYGALASGSYGTAVG
VSSTASGSGSVAVGEYSVASGEESVAVGGTSFFGLIPAEASGANSAAFGAGAGATADFSS
ALGSLSYASADSASAFGYGAYASGVNSVALGANSEAARDNTVSVGSAGKERQITSVAAGT
EATDAVNVAQLDAVKQSADATGKQFKASGGSDPADDVGSYVEGTYATAAGEASNAYGTGA
SAFGSGALAGARYATASGYNATATGESSTAIGGSLYYTDASGNVLLDGTTTASAAGATAL
GAGAQASGTFSSASGAGAIASGLQATADGYKASAGSDYSTAVGAFSAASGTRTSAFGYGA
AAAGNYASALGWGSTASGAYAAALGYSARATGEDATALGASAWATAAQTTSVGQFAWATA
QGGTAIGQNAFAYGGTNATALGINASASGAGSVALGSGARTSEANVVSVGGGNGVTAPAT
RRITNVGAAVNATDAVNKAQLDAVATAAGDTSARFQSSGTAVASASGVDSTAAGAGATAS
GLRSSALGVGSVAAGAGATANGAGSSATGARSTAIGLQTNAIGENGVAMGYNSFVRNSGS
NGVALGANAGVSADNAVALGAGSRVYEADTVSLGSGNGRGGPATRRIVNLTAGSVAAGST
DAINGGQLYQSLSNMATFLGGGAGLGAQGLFVAPTYVIQGASYNNVGAALAALDGKVSEL
DARTGGSGTAARSARMVGTSAVAAQATEAAPAASAATAATAAAATPVSGSIGTAQVGEST
AVASSATAVGTAARANDVTGTAIGGSAYAHGPNDTAIGSNAKVNADGSTAVGANSHIAAV
ATNAVAMGEGASVSAASGTALGQGASATAQGAVALGQGSVADRAQTVSIGSAGNERQLAN
VAAGTQATDAVNKSQLDNGVATAKSYTDARFGTMADSFEVLRGDVDARLRDQDRRIDRQG
AMSAAMLNMATSAAGIRTQNRVGAGIGFQNGESALSVGYQRAFSDRATVTIGGAFSSDDS
SIGIGAGFGW
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctggccagcggcaccgacagcgtcgccgtgggcggcgtcagcaccgccgcg
gccagcgccggcaacagcgtgggcatcgccgccgccaccggcgtcggcggcatcgccctg
ggcgccggcgcgcagagccagtccgactacgcgatcgcgctgggctacaacgccaacgtg
ttcccgaacctgccgggcaacgtcgattcggtcgccatcggccacagcgccggttcgttc
gcaccgcgcacggtgtcgttgggcagctatgcgctggcctccggcgacagcggcatcgcg
ctgggctacaaggccatcgcctggaaccccgacagcgtcgcgctgggcgcacgtgcggtg
acctcgacctaccacagcaacggcaccgcgctcggcaccgacagccaggccaacggcagc
gatgccaccgcgatcggctacggcgcgcgggtcagcacctggctggacgatgcgcgcaac
caggcgccgaccaatgcggtcgcgctcggcgcgcattcctacgccgcgcgcgacaacagc
gtgtcggtcggcgacgtggccaacggcctgacccggcagatcaccagcgtcgccgccggc
accgaagccaccgacgcggtcaacgtggcgcagttgcaggaggccggcaagtacctgcag
gccagtgccggcaacagcgatgccggcgcctacgtcgaaggcgacgacgcactcgccgcc
ggcgaggccgccaatgccatcggcaacggcagcaccgcgctcggcgccggcgccgacgcg
ctcaacagtggcgccacggcggtgggcagcggcgcagtcgccgccgggcagaacagcgcc
gccttcggcaccaatgcgcaggccaccgggccggcggcggtggcggtcggcggggtggcg
gtggacgccaacggcgagccgctgatcaccaagagcggcgtggcggtggagaccggcgcc
accagtgccggggtcggcggtaccgcgctgggcgccagcgccgatgccagcggtttcgcc
gcctcggcagtgggcgtgggcgcgtacgccggcggtgcgcaggcatcggccttcggcgcc
gtggccaacgccaccggcgactacgccacggcggtcggcacgcagagcgcggccaccggt
accagcagcgtggcggtcggcggtccggccgacctgattccgggactgggcctgttcgtg
cagacccaggccagcggcgccaatgccgccgcgttcggcgccggcgcgatcgcctcgggc
gacgagtccaccgccagcggcagcatgaccgaggcttcgggcctgcagagcaccgcgctg
ggctacttcgcctatgcaccgggcgaccatgccagcgcgctgggcgcgcagtcctgggcc
agcggcgccaacagcaccgcgctcggctactacagcaccgcgtttgcggcggacagcgtg
gcgctgggcgccaattcggtggcgcgccgggccaacacggtctcggtcggcgatgccggc
agcgagcggcaggtggtcaacgtcgccgcgggtacgcagtccaccgatgcggtcaatctc
gcgcagctcgatgcggtgcgcgccaccgccgaaggcacctccaagttcttcgcccacggc
ggcgcgggcacggtcggcgcctatgccgacggtgacggcgcgctggccgccggcgatgcg
gccaatgcctacggcagcggcgcggcggcgttcggcagcggcgcggcggcgatgggcgat
gacgcggtggcgctgggcaacggcagcacggccggcggcaccggcggcaccgccatcggc
ggccgcggccaggcctacgaccagtacaaccagccgatcgtcgatgccgacggcaagccg
gtgctggtcggtgccaatgccggcgagaacgccaccgcgctcggcgcgggcgcgcaggcg
acgggcagcgtcgccaccgccaccggctacggtgcgcaggccaccggcgaccacagcacc
gccggcggctacaaggcgcgtgcgaccggcaactacagcctggcgcagggcgacaacgcc
tgggccagcggcgaggacgccagtgcggtcggcgcctacgcctgggcgacggccgatggc
gcgtcggcgttcggcacctcggcctgggccaccggcaccaatgcctcggcgttcggtacc
ggggcgtgggccagcggcagcggcgccacctcgatcggcttcaacagctgggcgccgggg
ctgagcgccaccgcggtcggtcgcggcgcgttcggctacggcaactacagcgtggcgctg
ggcttccaggcgctgggcaaccaagtcaacaccatcgccatcggcaccaacaccgtggcc
gacgcggaaagcgcgatcagcatcggtgccggcagcgaggccaccgccgccaatgcggtg
gcgctgggtgccggggcggtcgccgaccgtgcctacagcgtgtcggtgggcagcgccggg
caggagcggcagatcaccaacgtggccgccggcaccgaggccaccgatgctgtcaacgtc
gcccagctggatgcggtgaagcaggccgcggcagcgaccagcaagtacttccaggccagc
ggcagcgccgacagcgatgccggcgccctggtcgacggcgacaacgcgctggcggccggc
gaggccgccaacgccaccgccgacggcgccactgcgctcggtggcggcgccaatgccgtg
gccgccggggcgaccgcgatcggcttcaacgccgtctccagcggggtcgatgcggtcgcg
ctgggcaacgccagccaggcgtcgggcgagaacagcatcgccatcggcagcaacgctcag
gccagcgagatcggcgccaccgccagcggtgccggcgcgcaggccagcggcacctatgcc
accgccaccggcaacgaagcggtggcctcggacaaccaggccacggccaccggcttccgc
agcgcggcctcgggcatcggcgccaccgcactgggcggctacagcgaggccaccggctac
ctgtcctcggcactgggctatggcgcgctggcctccggcagctacggcaccgcggtcggc
gtctcctccaccgcgtccggcagcggcagcgtggcggtgggcgagtacagcgtggcctcc
ggcgaggagagcgtggcggtcggcggcacctcgttcttcggcctgatcccggccgaggcc
tcgggcgccaacagcgcggcgttcggtgccggtgccggcgccaccgccgacttcagcagc
gcgctcggcagcctcagctacgccagcgccgacagcgccagcgccttcggctacggcgcc
tatgcgtccggggtcaacagcgtggccctgggtgcgaactccgaagcggcgcgcgacaac
accgtctcggtgggcagcgcaggcaaggagcggcagatcaccagcgtcgccgccggcacc
gaggccaccgacgcggtcaacgtcgcccaactcgacgcggtgaagcagtcggccgatgcc
accggcaagcagttcaaggccagcggcggcagcgatccggccgacgatgtcggcagctac
gtggagggcacctacgccaccgccgccggcgaagccagcaatgcctacggcaccggggct
tcggcattcggcagcggcgcgctggccggcgcccgctatgccaccgcgtccggctacaac
gccaccgccaccggcgaatccagcaccgcgatcggcggctcgctgtactacaccgatgcg
tccggcaacgtgctgctcgacggcaccaccaccgccagcgccgccggcgccaccgcgctc
ggcgcgggcgcgcaggccagcggcacgttcagcagcgccagcggcgccggcgccatcgcc
agcgggctgcaggccaccgccgacggctacaaggccagcgccggcagcgactacagcacc
gcggtcggtgccttcagcgccgccagcggcacgcgcaccagcgcgttcggctacggtgcg
gcggcggcgggcaactacgcctcggcgctgggctggggcagcaccgcctccggcgcgtat
gccgcggcgctgggctacagcgcccgcgccaccggcgaggatgcgaccgcgctcggcgcc
tcggcctgggccaccgcggcgcagaccacctcggtcggccagttcgcctgggctacggcg
caaggcggcaccgcgatcgggcagaacgccttcgcctatggcggcaccaacgccaccgcg
ctgggcatcaacgcctcggccagcggcgccggcagcgtggccctgggctcgggcgcgcgc
accagcgaagccaacgtggtgtcggtgggcggcggcaacggcgtcaccgcgccggccacg
cgccgcatcaccaacgtcggtgccgcggtcaacgccaccgatgcggtgaacaaggcgcag
ctggacgcggtggccaccgcggccggcgataccagcgcgcgcttccagagttccggcacc
gcggtggccagcgccagcggcgtggacagcaccgcggccggtgccggcgccaccgccagc
ggcctgcgcagttccgcgctgggcgtgggcagcgtcgccgccggcgccggtgccaccgcc
aacggtgccggcagctcggcgaccggtgcgcgcagcaccgcgatcggcctgcagaccaat
gcgatcggcgagaacggcgtggcgatgggctacaacagcttcgtccgcaacagcggcagc
aacggcgtcgcgctcggcgccaatgccggcgtctcggcggacaacgcggtggcgctcggt
gccggctcgcgggtgtacgaggccgacaccgtgtcgctgggcagcggcaacggccgtggc
ggcccggccacccggcgcatcgtcaacctgaccgccggcagcgtcgccgccggcagcacc
gacgcgatcaacggcggccagctgtaccagtcgctgagcaacatggccacgttcctgggc
ggcggcgccggactcggtgcgcaggggctgttcgtggcgccgacctacgtgatccagggc
gccagctacaacaacgtcggcgcggcgctggcggcgctggacggcaaggtcagcgaactg
gatgcgcgcaccggcggcagcggcaccgcggcacgcagcgcgcgcatggtcggcaccagt
gcggtggccgcgcaggccaccgaagcggcgcctgcggcgtcggccgcgaccgctgcaacc
gcggcggcggcgacgccggtgtccggcagcatcggcaccgcgcaggtcggcgaaagcacg
gcggtcgcctccagcgccacggcggtggggaccgccgcgcgcgccaacgacgtcaccggc
accgccatcggtggcagcgcctacgcgcacggccccaacgacaccgcgatcggcagcaac
gccaaggtcaatgccgacggcagcaccgcggtgggcgccaacagccacatcgcggcggtg
gcgaccaacgcggtggcgatgggcgagggcgccagcgtcagtgcggcctcgggtaccgcc
ctcggccagggcgccagcgccaccgcgcagggggcggtcgccctggggcaggggtcggtg
gccgatcgtgcgcagacggtctccatcggtagcgccggcaacgagcgccagctcgccaac
gtcgccgccggcacccaggccaccgatgcggtcaacaagagccagctcgacaacggcgtg
gctacggccaagtcgtacaccgatgcgcgcttcggcaccatggccgacagcttcgaggtg
ctgcgcggcgacgtcgatgcgcggttgcgcgaccaggaccgccgcatcgaccgccagggc
gcgatgagcgcggccatgctcaacatggccaccagcgccgccggcatccgcacccagaac
cgggtcggtgccggcatcggcttccagaacggcgagtcggcgctgtcggtgggctaccag
cgcgccttcagcgaccgcgccacggtgaccatcggcggtgccttcagcagcgacgacagc
tccatcggcatcggtgccggtttcggctggtga
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