Xanthomonas sacchari: SB85_12055
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Entry
SB85_12055 CDS
T03566
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_12055
Enzymes [BR:
xsa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SB85_12055
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SB85_12055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AJC46380
LinkDB
All DBs
Position
complement(2880938..2882488)
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AA seq
516 aa
AA seq
DB search
MSPLPTTAHTLRLVLGDQLDPEHAWFDVRDPGVVYVLMEVRQETDYVLHHAQKILAVFAA
MRDFARQLRATGHRVRYVAIDDASNRQSIPANLEALMAHYGAQRLQYQDPDEWRLDQQLR
QWGAAQAFVVEAVDSLHFYTRRGELADFFRGRPQWLMEHFYRHMRKRHRILLAADGTPEG
GQWNYDHDNRQPWHGEPPPPPDARPTHDHRALWASIQAAGVDSFGQPQAEAVRWPLNRAE
ALSCLDRFIVDALPHFGRYEDAMSTRSPRLFHSQLSFALNTKMLRPQEVVQRALAAYGAG
AAPLAAVEGFVRQILGWREYVRGIYWAHMPGYEARNALGHDTPLPAWFWTGDTHMRCLQH
AIGQSLQDAYAHHIQRLMVIGNFALLAGLDPAAVHRWYLGVYIDAFEWVELPNTVGMSQF
ADGGLLATKPYVSSAAYIDRMSDYCQGCRYDRKQKTGARACPYNALYWDFFARHQDTLGR
NRRLDMVYRQLRKLPATQLQALRAHAQHLRGRLDTL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgctgcccaccaccgcccacaccctgcgcctggtgctcggcgaccagctcgat
cccgagcacgcctggttcgacgtgcgcgatcccggcgtggtctatgtgctgatggaagtg
cgccaggagaccgactacgtcctgcaccatgcgcagaagatcctggcggtgttcgccgcg
atgcgcgatttcgcccgccagctgcgggcgacgggccatcgcgtgcgctacgtggcgatc
gatgacgccagcaatcgccaatccatccccgccaatctcgaggcgctgatggcgcactac
ggtgcgcagcgcctgcagtaccaggatccggacgaatggcgcctggatcagcagctgcgg
cagtggggcgcggcgcaggccttcgtcgtcgaggcggtggacagcctgcacttctacacg
cgccgcggcgaactggcggattttttccgcgggcgcccgcaatggttgatggagcacttc
taccggcacatgcgcaagcgccaccgcatcctgctggcagcggacggcacacccgagggc
gggcagtggaactacgaccacgacaatcgccagccctggcatggcgagccgccgccaccg
cccgatgcgcgcccgacccacgatcaccgcgcgctgtgggccagcatccaggccgccggc
gtggacagtttcggtcagccgcaggcagaggcggtgcgctggccgctgaaccgggccgag
gcgctgtcctgcctcgatcgcttcatcgtcgacgccctgccgcatttcggccgctacgag
gatgcgatgagcacgcgcagtccgcgcctgttccattcgcagctttccttcgccctcaac
accaagatgctgcggccgcaggaagtggtgcagcgcgcgctggcggcctatggcgctggc
gccgcgccgctggcagcggtggaaggtttcgtgcggcagatcctgggctggcgcgagtac
gtgcgcggcatctactgggcacacatgcctggctatgaagcgcgcaatgcgctcggccac
gacacgccgctgccggcctggttctggaccggcgacacgcatatgcgctgcctgcagcac
gccatcggccaatcgctgcaggatgcgtacgcgcaccatatccagcggctgatggtgatc
ggcaacttcgccctgctcgccggcctggatccggcggcggtgcatcgctggtacctgggt
gtctacatcgatgcgttcgaatgggtcgaactgcccaacacagtcggtatgagccagttc
gccgacggcggcctgctcgcgaccaagccctacgtcagcagcgcggcctacatcgaccgc
atgagcgactactgccagggctgccgctacgaccgcaagcagaagaccggcgcgcgtgcg
tgtccgtacaacgcgctgtactgggacttcttcgcgcggcaccaggacacgctagggcgc
aatcgtcgcctggacatggtctaccgccagttgcgcaagctgccggccacgcaactgcag
gcgctgcgcgcgcatgcgcaacacctgcgcggacgcctggacacgttgtag
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