Xanthomonas sacchari: SB85_12225
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Entry
SB85_12225 CDS
T03566
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03030
DNA replication
xsa03410
Base excision repair
xsa03420
Nucleotide excision repair
xsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SB85_12225
03410 Base excision repair
SB85_12225
03420 Nucleotide excision repair
SB85_12225
03440 Homologous recombination
SB85_12225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xsa03032
]
SB85_12225
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_12225
Enzymes [BR:
xsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SB85_12225
DNA replication proteins [BR:
xsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SB85_12225
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SB85_12225
NER (nucleotide excision repair)
GGR (global genome repair) factors
SB85_12225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AJC46412
LinkDB
All DBs
Position
complement(2922488..2925259)
Genome browser
AA seq
923 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDELYPLYKANRPPMPDELRAQVEPMCQIVHALGITILRQDGVEADDVIGTLALQGA
GDGLDVTISTGDKDFAQLVRPGVQLVNTMSGSRMDSDAAVMEKFGVWPHQIVDLLALMGD
AIDNVPGVEKCGPKTAAKWLAEYGSLDGVIAHADTIKGKIGDNLRAALARLPLNRELVTI
KTDVALPGGPRTLGLREQEPEQLRGLYQRYGFTQALRDLDGGVAAPEAASEATPSLRGTA
AGYARAAAPAAETALDPALAAKGDYTAVTTPEAFEALLVRLRAADGFAFDTETDALDAMR
ANLVGLSFATEPGRADYLPLGHDYPGAPVQLDRALALEMLKPLLEDPAKAKVGQHGKYDL
HVLRRHGVEVRGYADDTMLESFVLNSTASRHDMDSLARRYLGYDTVKYEDVAGKGAKQIA
FSQVAIDDATGYAAEDADITLRLHRTLSAQLDAEPALARVYREIEMPLVPVLARVEANGV
CVDIAELRKQSQDLSQRMLAAQQKATALAGRSFNMDSPKQLQAVLFDELKLPAVLKTPKG
QPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQAGAA
TGRLSSSDPSLQNIPIRTDDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLLR
AFGSGVDVHRATAAEVFGRKLEEVTGNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQ
DYVALYFSRYPGVRDFMERMREQARTQGYVETLFGRRLYLNDINARQQGLRAGAERAAIN
APMQGTAADIIKRAMVGVDAWLQDHRDRALMILQVHDELVFEADADFVDTLLPEVTGRMS
AAAELKVPLVVDSGVGDNWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagccgattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgccgccggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ctgcgcgccaccctcaaggaacgccccgagtacgtggccttcgtggtcgacgcgccgggc
aagaccttccgcgacgagctgtacccgctgtacaaggccaaccgtccgccgatgcccgac
gagctgcgcgcgcaggtcgagccgatgtgccagatcgtgcacgcgctgggcatcaccatc
ctgcgccaggacggggtcgaggccgacgacgtgatcggcaccctggccctgcagggcgcc
ggcgacggcctggacgtcaccatctccaccggcgacaaggatttcgcccagttggtgcgc
cccggcgtacaacttgtcaacaccatgagcggcagccgcatggattcggatgcggcggtg
atggagaagttcggggtctggccgcaccagatcgtcgatctgctggcgctgatgggcgac
gccatcgacaacgtgcccggggtggagaagtgcgggcccaagaccgcggccaagtggctg
gccgagtatggctcgctggacggggtgatcgcccatgccgacaccatcaagggcaagatc
ggcgacaacctgcgcgcggcgctggcgcggctgccgctgaaccgcgaactggtcaccatc
aagaccgacgtggcgctgcccggcggcccgcgcaccctgggcctgcgcgaacaggagccg
gagcagttgcgcggcctgtaccagcgctacggctttacccaggcgctgcgcgatctggac
ggcggcgtggccgcaccggaagccgccagcgaggcgacacccagcctgcgcggcaccgcc
gccggctatgcccgggccgcggcgccggccgccgagacggcgctggacccggcactggcc
gccaagggcgactacaccgcggtgaccacacccgaggcgttcgaagctctgctggtgcgc
ctgcgcgccgccgacggcttcgccttcgacaccgagaccgacgcgctggatgcaatgcgt
gccaacctggtcgggctcagcttcgccaccgagccgggccgcgccgactacctgccgctg
ggccacgactatcccggcgcgccggtgcaactggatcgcgcgctggcgctggagatgctc
aagccgctgctggaggacccggccaaggccaaggtcggccagcacggcaagtacgacctg
cacgtgctgcgccgccacggcgtggaggtgcgcggctacgccgacgacaccatgctcgag
agcttcgtgctcaactccaccgccagccgccacgacatggactcgctggcccggcgctac
ctgggctacgacacggtcaagtacgaggacgtggccggcaagggtgccaagcagatcgcg
ttctcgcaggtggccatcgacgacgccaccggctacgccgccgaggacgccgacatcacc
ctgcgcctgcaccgcacgttgtcggcgcaactggacgccgagccggcgctggcgcgggtc
taccgcgagatcgagatgccgctggtgccggtgctggcgcgggtcgaggccaacggcgtg
tgcgtggacatcgccgagctgcgcaagcagagccaggacctgagccagcgcatgctggcc
gcgcagcagaaggccaccgcgctggccggacgcagcttcaatatggactcgcccaagcag
ctgcaggcggtgctgttcgacgagctgaagctgccggcggtgctgaagacccccaagggc
cagcccagcaccaacgaggaggcgctggaggcgatcgccgaccagcacgagctgccgcgg
gtgatcctggagtaccgcggcctggccaagctgcgcagcacctacaccgacaagctgccg
gaaatggtcaaccccgacaccggtcgcgtgcacaccagctaccaccaggccggcgccgcc
accgggcggctgtcctcctccgatcccagcctgcagaacattccgatccgcaccgatgac
ggccgccgcatccgccgcgccttcgtcgccccgcccgggcgcaagctgatcgcctgcgac
tattcgcagatcgagttgcggatcatggcccacctgtccgaggatccgggcctgttgcgc
gccttcggcagcggcgtggacgtgcaccgcgccaccgccgccgaggtgttcgggcgcaag
ctcgaagaggtcaccggcaacgagcgccgcgccgccaaggcgatcaacttcggcctgatg
tacggcatgagcgcgttcggcctggcccgcaacctgggcatcggccgcggcgaggcgcag
gactacgtggcgctgtacttcagccgctacccgggcgtgcgcgacttcatggagcgcatg
cgcgagcaggcgcgcacccagggctacgtggagaccctgttcggccgccgcctgtacctg
aacgacatcaacgcccgccagcagggcctgcgcgccggtgccgagcgcgcggcgatcaac
gccccgatgcagggcaccgccgccgacatcatcaagcgcgccatggtcggcgtggacgcc
tggctgcaggaccaccgcgaccgcgcgttgatgatcctgcaggtgcacgacgaactggtg
ttcgaagccgatgccgacttcgtcgacaccttgctgccggaagtgaccgggcggatgtcc
gccgcggcggagctgaaggtgccgctggtggtggacagcggggtgggcgacaactgggac
gaggcgcattga
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