Xanthomonas sacchari: SB85_12280
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Entry
SB85_12280 CDS
T03566
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03420
Nucleotide excision repair
xsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SB85_12280 (uvrD)
03430 Mismatch repair
SB85_12280 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_12280 (uvrD)
Enzymes [BR:
xsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SB85_12280 (uvrD)
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SB85_12280 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SB85_12280 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
AJC46422
LinkDB
All DBs
Position
complement(2934677..2936878)
Genome browser
AA seq
733 aa
AA seq
DB search
MDVSHLLDDLNPAQREAVSAAPGHYLVLAGAGSGKTRVLTHRIAWLHQVHGVPVHGILAV
TFTNKAAGEMRHRADLQLRNGSRGMWIGTFHGLAHRLLRLHWQDAKLPESFQVLDADDQL
RLVKRVVQQLELDEGKYPPKQIVWWINQQKDEGRRAQHIQPEPRDEWVTTLRNAYALYQE
RCDRAGLVDFAELLLRAHELLRDTPALLAHYRARFGEILVDEFQDTNAIQYAFVRVLAGD
SGHVFVVGDDDQAIYGWRGAKVENVQRFLTDFPSAQTIRLEQNYRSSANILNAANAVIAH
NPDRIGKQLWTDSGDGEPIDLYAAYNEVDEARYVVERVRQWVRDGGSYSEAAVLYRSNAQ
SRAFEEALIAEQVPYRVYGGMRFFERAEIKDTLAYLRLVANRADDAAFERAVNTPPRGIG
DRTLDEVRRLARAQSLSLWAAAQQAAQQGGDLAARARNALGQFLGLIEQLALDVAGLPLP
EQIDQVLARSTLREHWGKESRGGLDSESRTDNLDELVSVASRFVRADGDEDADEGRQAMT
ELVAFLAYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLAGMEDGLFPSARSLEES
GRLEEERRLAYVGITRARHKLVLSYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQ
VSRSASLGAPRSLGHSVIEAPAIKLGANVQHPKFGGGVVIDYEGSGAHARVQVQFDEAGA
KWLVMAYANLTVL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgacgatctgaaccccgcccagcgcgaggccgtttccgcc
gcgcccggccattatctggtcctggccggcgccggctccggcaagacgcgcgtgctcacc
catcgcatcgcctggttgcaccaggtgcatggcgtgccggtgcacgggatcctggcggtc
actttcaccaacaaggccgcgggcgagatgcgccaccgcgccgacctgcagttgcgcaac
ggcagccgcggcatgtggatcggtaccttccacggcctggcgcaccgcctgctgcgcctg
cattggcaggacgcgaagctgcccgagagcttccaggtgctcgacgccgacgaccagctg
cggctggtcaagcgcgtggtgcagcagctggagctggacgagggcaagtacccgcccaag
cagatcgtgtggtggatcaaccagcagaaggacgagggccgccgcgcccagcacatccag
ccggaaccgcgcgacgagtgggtgaccaccctgcgcaacgcctacgcgctctaccaggag
cgctgcgaccgcgccggcctggtcgacttcgccgaactgctgctgcgcgcgcacgaattg
ttgcgcgacaccccggcgctgctggcgcactaccgcgcccgcttcggcgagatcctggtc
gacgaattccaggacaccaacgccatccagtacgcgttcgtgcgcgtgctcgccggcgac
agcggccacgtgttcgtggtcggcgacgacgaccaggcgatctacggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctcaccgatttccccagcgcgcagaccatccgcctg
gagcagaactaccgctccagcgccaacatcctcaacgccgccaacgcggtgatcgcgcac
aaccccgaccgtatcggcaagcagctgtggaccgattcgggcgatggcgagccgatcgac
ctgtacgccgcctacaacgaggtggacgaggcgcgctacgtggtcgagcgcgtgcgtcag
tgggtgcgcgacggcggcagctacagcgaggcggcggtgctctaccgcagcaacgcgcag
tcgcgtgccttcgaagaggcgctgatcgccgaacaggtgccatatcgggtctatggcggc
atgcgtttcttcgagcgcgccgaaatcaaggacaccctggcctatctgcgcctggtcgcc
aatcgcgccgacgatgcggcgttcgaacgcgcggtcaacaccccgccgcgcggcatcggc
gaccgcaccctggacgaagtgcggcgtttggcgcgcgcgcagtcgctgtcgctgtgggcg
gcggcgcaacaggccgcgcagcagggcggcgacctggccgcacgcgcgcgcaacgcgctg
ggccagttcctcggcctgatcgagcaactggccctggacgtggccgggctgccgctgccc
gaacagatcgaccaggtgctggcgcgctccaccctgcgcgagcactggggcaaggaaagc
cgcggcgggctggattcggaatcgcgcaccgacaacctcgacgaactggtgtcggtggcc
tcgcgtttcgtccgcgccgacggcgacgaggacgccgacgaaggccgccaggcgatgacc
gagctggtcgcattcctggcgtatgcctcgctggaggccggcgaaggccaggcccaggcc
ggcgaggaaggtgtgcagttgatgaccctgcactcggccaagggcctggaattcccgatc
gtgttcctggccggcatggaagacggcctgttccccagtgcgcgttcgctggaagagagc
gggcgcctggaggaagagcggcgcctggcctatgtcggcatcacccgcgcccgccacaag
ctggtgctgagctatgccgagtcgcggcgcatccacggtcaggacaactacaacgtgccc
tcgcgcttcctgcgcgagatcccgcgcgaactgctgcacgaagtgcggccgaaggtgcag
gtctcgcgcagcgcgtcgctgggcgcgccgcgcagcctcgggcacagcgtgatcgaggcc
ccggcgatcaagctcggcgccaacgtgcagcaccccaagttcggcggcggcgtggtcatc
gactacgaaggcagcggcgcccacgcccgcgtgcaggtgcagttcgacgaggccggcgcc
aagtggctggtgatggcgtacgccaatctgacggtgttgtga
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