Xanthomonas sacchari: SB85_12565
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Entry
SB85_12565 CDS
T03566
Name
(GenBank) helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
SB85_12565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
Zn_ribbon_3CxxC_2
ResIII
Cas3-like_C_2
ZapB
GAS
Motif
Other DBs
NCBI-ProteinID:
AJC46471
LinkDB
All DBs
Position
complement(3006761..3013123)
Genome browser
AA seq
2120 aa
AA seq
DB search
MQPLIVSQQITQGVADFLRAAFPATTPGFDGLIQRLLADRDRVFKGPYLTLPLPFRKQAD
RGLPTFGWLPPGFIPHAHQGRAFARLTGEQARSTLVATGTGSGKTECFLYPILEHCREQR
ELGRSGIKAIILYPMNALASDQASRLAKEILRTPALAGIRAGLYVGEAPAEESSRVQQLA
DGGFSIITDRNALRENPPDILLTNYKMLDFLLIRAADAPLWARQQPDTLRYLVVDELHTF
DGAQGTDLACLIRRLKGRLETPPGQLVCVGTSATLGSDVEHDLLAFASQIFGETLDDHAV
IAEDREPVADYLADAVVEFTHSPPPDAASVLDPAGHADLQSWLAAQVRLWFGTPYSAEQV
VDAGWRCRLGGMLKSHFAFQNLLRDMERLGPRAVALDDLLAVLARRLPLHADARYPLLWL
GSLLALVAHARQPRGVSLDTVHGEQDTAFFLQLKVELWLRELRRMVASLDDPPRLTHHDD
LGKAEQAQVWLPVIHCRDCHATGWGATLPRTSPNQFSQDIQQFYSAFFAEDVSTRFLFPH
GESADPKVFEHRKVCPRCGTLHALGQTHCDCAEDPVALVDVDVTANLREGTRNGARYTRS
HHDCPYCGGHKTLSIVGSQAASLAAVMLAQLFGSRFNPDKKLIAFSDSVQDAAHRAGFLA
ARTWRLNLRPAVAQVIAVAQQAGELLTLAQLPQAFEDHWLPAMGQGHYLANFLPPQLHWL
RDFETLMSEGTLPANSELPQDLRRILPWVLNAEFGQDAHIGRSLTVTGTASVEPLPQLLT
SAVQWMLPRLQATLEPLSDVPADALAVLLQGIVQSMQRLGAWRDSGLHLYAQVGNRPWVY
RRDPVQFQMLSGPRPPRFVSLVDYQRCVGVLGSHAKWYRAWAFKALTPLHALALGADSLL
PALYQLAFEALAGVGLLGAEQADGKPEIRVWGLEPSAFLVSLGSRTWRCDTCRSEWRSGI
EVSLARQPCRHPGCQGHLETLAEGDADYYRSLYLRADIQRVVAHEHTGLLPRGTRERVEH
SFKSDVQAPGSINVLSATPTLEMGIDIGDLSAVLQCSVPPQQANYIQRVGRAGRSTGNAL
LLTMAASKPHDLYFWADPKEMIAGSVPAPGVFLNASAVLERQLTAFTLDCWVRERGRSGS
IPQEIRMALSAVDNGATTRFPFPWLEYVEANRASLLDRFLALFQQGGGQILTEATRHWLA
RFVNGRQDEESSLTFKIISKLQGIARDVAQIKRLREKTAKEVEKLEQLPVRGEEQEEELK
TLRQERAALARLIGGIEGKPTLNVFTDEGLLPNYAFPEQGVLLRSIIVRDTRREGPPAEP
LTFEYERPGATAITELAPNNTFYAEGRRVVINQVDVSRVKPEAWRLCRQCSYAEPLSAGD
RHQQCPRCGDGQWRDTGRVHEMLRLTTVFARTLDRESRIADDSDERTRGFYVRQALVDSP
PEAVRQAFAIDNPSFPFGFEFLDRVTFREVNFGEQTVDATPMTVAGEELNRPGFAICPEC
GTLQRRRNAEDLYRNHAPWCSRRKTPEASAQQCIFLYREFASEGIRLFLPEVGFAESKEA
LLSFISALELGLSKRFKGAVAHLRIATDIRMAADSEPARTYLVIYDSVPGGTGYLKELMR
DPAPLFEVFSLAATALNTCTCNQDDTADGCYRCMYRYRNSHERQAISRTVAQKLLAQILE
HRAELKPIGNLSQQPDNSLLESTLEKRFLEALRREHDGVTFTLKDKLVGGKHGYLVQAGS
RRWRLELQVALSEREGVVVPSKPDFVFWPDDGVDDLPVVVFTDGWHYHKHIVADDLAKRM
AIAKSGRFAVWTLTWDDIDAALRAEPAPDSTAWDELLLGPADQVVTRLCEAQGIASLAAF
HRLSPFLQLHRRLAAGRHDALRRLAGVLGIAMSVPPGDDAALQGFKQGAFRCRLGDYGLL
PDTSTHRWGHRTWSAVVQWLAGLSPEQLQQWMTGKAASPAEPVMLVQWQPEDIPELDLQR
RWRHLWQCLNLLMPLRHLWAGHDEMAGLSSFQASPALRQAEQTFDSHWQTALELASPDVQ
AWLLALAHAGAPLPEIGFELIDERGRVLAEAELAWVSLKIAVLLTDYQADASSFEAEGWT
IHIATEDAPVRALLDSLKEH
NT seq
6363 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccctgatcgtctctcaacagatcacccaaggcgtcgccgactttctgcgcgcg
gccttcccggccaccacgccgggcttcgacggcctgatccagcgcctcctggccgaccgc
gaccgggtgttcaaggggccgtacctaaccttgccgctgccgtttcgcaagcaggccgat
agaggcctgcccacgttcggctggctgccgccgggcttcatcccccatgcccaccagggc
cgggcgttcgcacgcctgaccggagagcaggctcgatcgaccctggtggccaccggcacc
ggctcgggcaagaccgagtgcttcctctatccaatcctggagcattgccgcgaacaacgc
gaactgggccggtcgggcatcaaggccatcatcctgtacccgatgaacgcgctggcctcg
gatcaggccagccgcctggccaaggagatcctgcgcacacccgcactggccggtatccgc
gcaggcctgtacgtgggcgaggccccggccgaggaatcctcccgcgtgcagcaactggcc
gatggcggcttctcgatcatcaccgaccgcaacgcgctgcgcgagaacccgccggacatc
ctgctgaccaactacaagatgctggacttcctgctgatccgtgccgccgatgcgccgctg
tgggcgcggcagcaaccggacacgctgcgctatctggtggtcgatgagctgcataccttc
gacggtgcacagggcacggatctggcctgcctgattcgccgcctcaagggtcggctggag
acgccgccggggcaactggtgtgcgtgggtacctcggccacactgggcagcgatgtcgaa
cacgacttgttggcgtttgccagccagatcttcggtgagacgctggatgaccacgccgtg
atcgccgaagaccgcgagccggtggcggactatctggcggatgccgtggtggagttcacc
cactctccgccgccggacgccgcgtcggtgctggatccggcaggccatgccgacttgcag
tcctggctggcggctcaggtgcgactgtggttcggcaccccgtacagtgccgaacaagtg
gtcgatgcgggctggcgctgtcggttgggcgggatgctgaaaagccatttcgcctttcag
aacctgttgcgcgacatggagcgcctggggccacgcgccgtagcgctggacgatctgttg
gcggtactcgcgcgccgcctgccactacacgccgatgcgcgctatccactgctgtggctg
ggcagcctgctggcgctggtggcgcatgcgcgccagcctcgtggcgtgtcgctcgacacg
gtgcacggcgaacaggacacagccttcttcctgcagctcaaggtggaactctggctgcgc
gagctgcggcgcatggtggcttcgctggacgacccgcctcgactgacccatcacgatgac
ctgggcaaggccgagcaggcacaggtctggttgccggtgatccactgccgtgactgccac
gccaccggctggggcgcgaccttgcccaggaccagcccgaaccagttcagccaggacatc
cagcagttttacagcgccttcttcgccgaggatgtcagcacccgctttctgttccctcat
ggcgaaagcgcggacccgaaggtgttcgagcacaggaaggtctgcccgcgctgcggtacc
ctgcatgcgttggggcagacgcactgcgactgtgccgaggacccggtcgcgctggtggat
gtcgacgtgaccgccaacctgcgcgaaggcacgcgcaacggcgcccgctatacccgttcc
catcatgactgcccgtactgcggcggacacaagacgctgtccatcgtcggttcgcaagcg
gccagcctggcggcggtgatgctggcgcaactgttcggttcacgtttcaacccggacaag
aagctgatcgcgttctccgattcggtgcaggatgcggcgcaccgtgccgggtttctcgcg
gcccggacctggcgcttgaacttgcgcccggcggtggcccaggtaatcgccgtggcgcag
caggcaggggagctgctgacgctggcgcaactgccgcaggccttcgaggaccactggctg
cccgcaatggggcagggccattacctggccaacttcctgccgccgcaactgcactggctg
cgagatttcgaaacgctgatgagcgaaggtacgctgccggccaacagcgagttgccgcag
gatttgcgtcgcatcctgccgtgggtgctgaatgccgagttcggccaggacgcccatatc
ggccgcagcctgaccgtgaccgggaccgccagcgtggaaccgctaccacagctactgaca
tcggccgtgcagtggatgctgccacgcctgcaggccacgctggagccgctgtctgatgtg
ccggcggatgccctggcggtactcctgcaaggcatcgtgcaatccatgcagcggctgggg
gcctggcgcgactctggcctgcatttgtatgcacaggtcggcaaccggccgtgggtctat
aggcgcgatccggtgcaattccaaatgctgtccggcccgcggccgccacgcttcgtgagc
ctggtcgattaccagcgctgcgtcggtgtgttgggcagccatgcgaagtggtatcgcgct
tgggccttcaaggcattgacgccgctgcatgcgttggctctgggcgctgacagtttgctg
ccggcgctgtatcagctggcgttcgaggcgctggccggagtgggtttgctcggcgctgaa
caggcagacggcaagccggagattcgcgtgtgggggctggagccgagcgcttttctggtt
tccttaggcagtcgcacttggcgttgcgacacctgccgcagcgagtggcgctccgggatt
gaagtttcgcttgcccggcagccttgccggcatcccggctgccaagggcatctggaaacg
ctggcggaaggcgatgcagactattaccgcagcctgtatctgcgtgcggacatccagcgc
gtggtcgctcacgaacacaccggcctgctgccacgcggcacgcgcgagcgggtggagcac
agcttcaagtccgatgtccaggctcctggcagcatcaatgtgctctcggccacgccgacg
ctggagatggggatcgatatcggcgacctgtcggcagtgctgcaatgttccgtgccgccg
cagcaggccaactacatccagcgtgtgggacgtgcgggacgcagcaccggcaatgccttg
ttgctgaccatggcagccagtaaaccgcacgacctgtatttctgggccgatcccaaggaa
atgattgccggcagcgtgccggcaccgggcgtgttcctcaatgcctcggcggtgctggag
cgccagttgacggcgttcacgctggattgctgggtgcgcgaacggggtcggagcggatcg
attccgcaggagatccgcatggcgctcagcgcggtggacaacggtgcgacgacgcgcttt
cccttcccctggctggagtatgtggaggcaaaccgggccagcctgctggatcgcttcctg
gcgctgttccagcaaggcggcgggcagatcctgaccgaggccacccgacattggttggca
cgtttcgtcaatggtcggcaggacgaggaaagctccctgaccttcaagatcatcagcaag
ctgcagggcatcgcccgtgacgtggcacagatcaagcgtctgcgcgagaagaccgccaag
gaagtcgagaagctggagcagcttccggtgcgcggcgaggaacaagaggaagaactgaaa
accctgcgccaagaacgtgcggcgttggcgcgcctgatcggtgggatcgagggcaagccc
accctgaacgtcttcaccgacgaaggcctgctgcccaactatgccttccccgaacaaggc
gtgttgctgcgctcgatcatcgtgcgcgacacccgccgggaaggaccgcctgccgagcca
ttgaccttcgaatacgagcgccccggcgcaaccgccatcaccgagctggcgcccaacaac
accttctatgccgaaggccgccgggtggttatcaatcaggtggatgtttcgcgcgtcaaa
ccggaggcctggcgcctgtgccgccagtgctcctacgccgagcctttgtcggcaggcgac
cgtcaccaacaatgcccgcgctgcggcgacggccagtggcgcgacaccgggagggtccat
gaaatgctgcgcctgaccacggtgttcgcgcgcacgcttgaccgcgagagtcggatcgcc
gacgactccgacgagcgcacgcgtggtttctacgtgcgccaggcgttggtggatagcccg
ccggaagcggtgcgccaggcgttcgccatcgacaacccaagtttcccgttcggattcgaa
ttccttgaccgggtgacattccgcgaggtgaacttcggcgagcagacggtggatgccacg
ccgatgaccgtcgcgggcgaagaactcaaccggccgggctttgccatttgccctgagtgc
ggcacgctacagcgtcgtcgcaatgcagaagatctttatcgcaaccatgccccctggtgc
tcacgccgcaagacgcccgaggccagtgcccagcaatgcatcttcctgtaccgggagttc
gccagcgaaggtatccggctgttcctgcccgaggtcggatttgccgaatccaaggaagcc
ttgctgagcttcatctccgcgctggagctgggactgagcaagcgcttcaagggtgcggtg
gcgcacctgcgcatcgctaccgacatacggatggcggcagactcggagccggcgcggacc
tatctggtgatctacgacagcgtgccgggcggcaccggatacttgaaggaactgatgcgc
gacccggcaccgttgttcgaggtgttcagtctggcagcaaccgcattgaacacctgcact
tgcaaccaggatgacaccgccgacggctgctatcggtgcatgtaccgctaccgcaacagc
catgaacgccaagccatctcgcgcacggtggcgcagaagctgttggcacagatcctggag
caccgcgcagagttgaagcccatcggcaacctttcccagcagccggacaatagcctgctg
gaaagtacgctggaaaagcgatttcttgaggcactgcggcgagagcatgatggtgtcact
ttcacgctcaaggacaagctcgtcggcggtaagcatgggtacctagtccaggcaggcagt
cgccgctggcgtctggaattgcaggtggcactcagcgagcgcgagggtgtcgtcgtgcca
agcaaaccggatttcgttttctggcccgacgacggcgtggacgatttgccggtcgtggta
ttcactgatggctggcattaccacaagcacatcgtggccgacgatctggccaagcgcatg
gcgatagccaagagcgggcggttcgctgtctggacactgacctgggacgacattgacgcg
gcactgcgtgccgaaccggccccggattccactgcctgggacgaattgctgctcggacct
gctgatcaggtggtcacacgtctatgcgaggctcaggggatcgcctcgttggccgccttc
caccgcttgtcaccttttctgcaactgcatcgtcggctggcagcgggacggcacgatgcc
ttacgccgcctcgccggcgtactgggtatcgccatgtcggtgccacctggcgatgacgct
gccttgcaaggcttcaagcaaggcgccttccgctgtcggctcggcgactatggcttgtta
cccgacaccagcacgcaccgctggggccatcgcacctggagcgctgtcgtgcaatggctg
gccggtctgtcgccggagcagttgcagcaatggatgaccggcaaggcagcatcacccgca
gagcctgtgatgctggtgcagtggcaaccggaagatataccggagctcgatctgcaacgg
cgctggcgccatctctggcagtgcctgaacctgctgatgcccttgcgccatctttgggca
ggccatgacgagatggctggcctgtctagcttccaggccagccctgcactgcgccaagca
gagcagacgttcgacagtcattggcaaacggcactggagttggccagcccggatgtgcag
gcatggttgcttgcattggcgcatgcaggagcaccgctgccggaaatcggcttcgaattg
atcgacgaacgcggccgagtactggcggaggcagagctggcctgggtcagcctgaagatc
gccgtactgctgaccgattaccaggccgatgcgtccagcttcgaggcagaaggctggacg
atccatatcgcaaccgaggacgcgccagtccgggcgcttctggatagcttgaaggaacat
tga
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