Xanthomonas sacchari: SB85_13250
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Entry
SB85_13250 CDS
T03566
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SB85_13250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_13250
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SB85_13250
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SB85_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJC46577
LinkDB
All DBs
Position
3179727..3183143
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AA seq
1138 aa
AA seq
DB search
MPAPSAPDFRLYPSNALDTLAALLAEELRRPPPGQPLLAPEVVLIPQVAMRRWLQSTLAA
VHGVAANLEFLTPGEFVARALERNLGAAVDDLDMATMHWRLYAALQADLGSDAALAPLAG
YLADGDALKPWSLAGELSNVFEKYQAWRRDWLLRWEGGADPDDPQARLWRRIATGRAYRA
RRIGQYLDRYARPDGPLPQGLPRRLFAFAVLNISPDVLRVLATQARAGTLHFYLPTPAQG
YWGDLQTLWQRRREGGAVDLFADHVQENPLLQAWGAAGRDFMALIGDYEVVHPLAEIAVY
ADPLESGRRALADGGLGDSLLRRMQSDLFHRRAPARPAPLAAVDPHDPSLQVHACHTRLR
ELQVLHDQLRALLDDPRFEPPLQPREIAVLSPDIDPYVPYLDAVFGGHAGDDALPYALAD
ASPLASEPLAEVFLALLGLPIARFGLHEILDLLASAPIAEAAGLDEAGLERLRAWLHAAG
ARWGLDAAHRQRHQAPADDAYTWRFALDRLLLGHASGAEDDIDGVAPWPQLEGSALAALD
TLLRLLRVLDRHQAALAEPMPPAQWREVLLGLLEALLPQSPSAPRQQRALERLRALIDQF
ARDAARADYADYADAVPAEVVRAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRVIC
LLGMNDGDFPRRDPAAGLNRLTAELGTTRRRHGDRSTREDDRFLFLQLFASAQEVFYLSY
LGADARDGSVREPSPLVGELLACAAQYHADPAAAAALVVRHPLQPFAAAAFGATGAEDAD
PRRFSYRRQWRPAVDSLVGQRQPLAPWIDALPAAADDALPAQLSIDDLRRLLVDPAGQFL
RQRLGLRLPDPAQADSDLEPLLAPSRGLDQYGLQQQVFEAVLREDTEALYERLRARALLP
SGPLGRRQLDERVRQLRPYAEAFRQWRGGDAAPLAPRLQVDLDGTALHGRLPGWYAPGVA
RVQVGALSGRSAIRHGLEWLLLRAAGERAPYVRFFDHDDSLGPHPMDREPLPAAQAQQAL
GELLQLYRHGRQAPLAFAPYSSWKYYQAARAGDLDKAIKDAAAQWQASFGWSEADSPELR
LVGRGRDPFADAQRFAEFAATSQRVFGLLEQGDAGPALDPQRLSESWQRWRGTQEDAE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccccgtccgcgcccgatttccggctgtatccgtccaacgcgctggataccctg
gccgccctgctcgccgaagaactgcgccggccgccgccggggcagcccttgctggcgccg
gaggtggtgctgatcccgcaggtggcgatgcggcgctggctgcagtcgaccctggccgcg
gtgcacggggtggcggcgaacctggaattcctgactcccggcgaattcgtcgcgcgcgcg
ctggagcgcaatctcggcgcggcggtcgacgacctggatatggcgaccatgcattggcgc
ctgtacgcggcgctgcaggccgacctgggcagcgatgcggcgctggcgccgttggccggc
tatctggccgacggcgatgcgctcaagccgtggagcctggccggcgagctgagcaacgtg
ttcgagaagtaccaggcctggcggcgcgattggctgctgcgctgggaaggcggcgccgac
ccggacgatccgcaggcgcggctgtggcggcgcatcgccacgggccgcgcctaccgcgca
cgccgcatcggccaatacctggaccgctacgcgcgccctgacgggccgctgccgcagggc
ctgccgcggcgcctgttcgccttcgccgtgctcaacatctccccggacgtgctgcgcgtg
ctggccacgcaggcgcgcgccggcacgctgcacttctacctgccgaccccggcgcagggt
tattggggcgatctgcagacgctgtggcagcgccgccgcgagggtggggcggtggacctg
ttcgccgaccacgtgcaggagaacccgctgctgcaggcctggggcgcggccggacgcgac
ttcatggcgttgatcggcgactacgaggtggtgcacccgctggccgagatcgcggtctac
gccgatccgctggagtcgggccggcgcgcgctggccgatggtggcctcggcgacagcctg
ctgcggcgcatgcagagcgatctgttccatcgccgcgcgccggcgcggccggcgccgctg
gccgcggtggatccgcacgatcccagcctgcaggtgcacgcctgccacacccgcctgcgc
gaattgcaggtgctgcacgatcagttgcgcgcgctgctggacgacccgcgcttcgagccg
ccgctgcagccgcgcgagatcgcggtgctgtcgccggacatcgacccctacgtgccgtac
ctggacgcggtgttcggcggccacgccggcgacgacgccttgccctatgcgctggccgac
gccagcccgctggccagcgagccgctggccgaggtgtttctggcgctgctcggcctgccg
atcgcgcgcttcggcctgcacgagatcctggacctgctcgccagcgcgccgatcgccgag
gccgccggcctcgacgaggccgggctggaacgtctgcgcgcctggctgcacgccgccggc
gcgcgctggggcctggacgcggcgcaccggcagcgtcaccaggcgccggccgacgacgcc
tatacctggcgcttcgccctggaccggctgttgctcggtcacgccagcggcgccgaggac
gacatcgacggcgtggcgccgtggccgcagttggaaggcagcgcgctggcggcgctggac
acgttgctgcgcctgctgcgcgtgctcgaccgccaccaggcggcgctggccgagccgatg
ccgcctgcgcagtggcgcgaagtgctgctgggcctgctcgaggcgctgctgccgcagagt
ccgtcggcaccgcgccagcagcgcgcgctggagcgcttgcgcgcgctgatcgaccagttc
gcccgcgacgccgcccgcgccgactacgccgactacgccgacgcggtgccggccgaagtg
gtccgcgcgcacttcgccgcggtgctgggcgaatcggacacgcgcgcgccgctgctcacc
ggcggcatcagcttcggccgcatggtgccgatgcggctgctgccgttccgggtcatctgc
ctgctgggcatgaatgatggcgacttcccgcgccgcgatccggccgccgggctcaaccgc
ctcaccgccgaactgggcaccacgcgccgccgccacggcgaccgttcgacgcgcgaggac
gaccgcttcctgttcctgcagctgttcgcctcggcgcaggaggtgttctacctgagctac
ctgggcgccgacgcgcgcgacggcagcgtgcgcgaaccctcgccgctggtcggcgaactg
ctggcctgcgcagcccagtaccatgccgacccggccgccgccgccgcgctggtggtgcgg
catccgctgcagccgttcgccgccgccgcgttcggcgccaccggtgcggaggacgccgat
ccgcgccggttcagctaccgccggcaatggcggccggcggtggacagcctggtcggccag
cgccagccgctggcgccgtggatcgacgcgctgccggccgcggccgacgacgcgctgccg
gcgcaactgtccatcgacgacctgcgccggctgctggtcgatccggccgggcagttcctg
cgccagcgcctgggcctgcgcctgcccgatccggcacaggccgacagcgatctggaacca
ttgctggcgcccagccgcgggctcgatcagtacggcctgcagcagcaggtgttcgaggcg
gtgctgcgcgaggacaccgaggccctgtacgaacgcctgcgcgcccgcgcgttgctgccg
tccgggccgctgggccggcgccagctcgacgagcgcgtgcgccagttgcgcccgtacgcc
gaggcgttccggcagtggcgcggtggcgacgccgcgccactggcgccgcggctgcaggtg
gacctcgacggcaccgcgctgcatggccgcctgccgggttggtacgcgcccggcgtggca
cgcgtgcaggtgggcgccttgagcgggcgcagcgcgatccgccacggcctggaatggctg
ctgctgcgcgccgccggcgaacgcgcgccctacgtgcgtttcttcgaccacgacgacagc
ctcggcccgcatccgatggaccgcgagccgctgcccgccgcccaggcgcagcaggcgctg
ggcgaactgctgcagctgtaccggcatggccggcaggcgccgttggcgttcgcgccgtac
agcagctggaagtactaccaggccgcgcgcgccggcgatctcgacaaggcaatcaaggac
gctgccgcgcaatggcaggccagcttcggctggagcgaggcggacagcccggaactgcgc
ctggtcggccgcggccgcgaccccttcgccgatgcgcagcgcttcgccgagttcgccgcc
accagccagcgcgtgttcggcctgctcgaacagggcgacgccggccccgcactcgatccc
cagcggctgagcgagagctggcagcgctggcgcggcacccaggaagacgccgaatga
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