Xanthomonas sacchari: SB85_13540
Help
Entry
SB85_13540 CDS
T03566
Name
(GenBank) coagulation factor 5/8 type domain protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa00520
Amino sugar and nucleotide sugar metabolism
xsa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
SB85_13540
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
SB85_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
F5_F8_type_C
F5_F8_type_C_2
fn3
CBM_AftD
DUF4992
Motif
Other DBs
NCBI-ProteinID:
AJC47662
LinkDB
All DBs
Position
complement(3266505..3268307)
Genome browser
AA seq
600 aa
AA seq
DB search
MALLASAGLAAAQAPGQRSYANPIDLDYRYNFEQLNEGISYRTGADPVFVRFGDAYYLFQ
TLADGYWRSSNLLDWQFVTPSRWPFESIVAPAVVADGDRLVIMQSAFEPRPLLQTRDPAS
GKLDFLTRLLPKLPRAQPIGTEMKGRPLSDVPPGPWDPDLFIDDDGQWYLYWGSSDRYPL
YGIAMDRNAQGFAFRGVPTPLLVLDPAQHGWERFGPDHRGARFPDGSPIGSYLEGAWMTK
TGGRYYLQYGAPGSEYNAYANGVYVGKHPLGPFVYAPYNPVAYKPGGFMQGAGHGSTFQD
AHGNWWNSGTAWIGANWTFERRIVLFPAAFAADGQMRVSTRFGDFPHWMPDGPVADPEAL
FTGWMLLSYRKPATASSTLDGFAADRATDEDPRSYWVAARNTPGETLTVDLGGERSVRAV
QVNFADYGAGRYGDAPDIYTAFRLQHSRDGRHWLPLAEVGDGTDRRDRPNAYLQLPAPVH
TRYIRYVHGHVGAAHLAISDLRVFGNADGAPPPAPTGVVAQRDADRRNARVHWQAVPGAV
GYNVRWGLRADRLNLTYQVFADRGTDLEIRALNRDQDYVFAVEAFDERGVSPLSARIAVP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
ctggcgctgctggcgtccgccgggctggccgcggcgcaggcgccaggccagcgcagctac
gccaatccgatcgacctggattaccgctacaacttcgagcaactcaacgaaggcatttcc
taccgcaccggcgccgacccggtgttcgtgcgcttcggcgacgcctactatctgttccag
accctggccgacggctactggcgctccagcaacctgctcgactggcagttcgtgacgccc
agccgctggccgttcgagagcatcgtcgcgccggcggtggtggccgacggcgaccgcctg
gtgatcatgcagtcggccttcgaaccacgcccgctgctgcagacccgcgacccggccagc
ggcaagctcgacttcctgacccggctgctgcccaagctgccgcgcgcccagccgatcggc
accgagatgaagggccgcccgctcagcgacgtgccgcccggcccctgggacccggacctg
ttcatcgacgacgacggccagtggtacctgtactggggctcgtcggaccgctatccgctg
tatggcatcgccatggatcgcaacgcgcaggggttcgccttccgcggcgtaccgacgccc
ttgctcgttctggacccggcgcagcacggctgggagcgcttcggccccgaccaccgcggt
gcccgcttccccgacggcagcccgatcggcagctacctggaaggcgcatggatgaccaag
accggcggccgctactacctgcagtacggcgcgcccggcagcgagtacaacgcctacgcc
aacggcgtgtacgtcggcaagcacccgctcggccccttcgtctacgcaccctacaacccg
gtggcctacaagcccggcggcttcatgcagggcgccggccacggctccaccttccaggac
gcgcacggtaactggtggaacagcggcaccgcctggatcggcgccaactggaccttcgaa
cggcgcatcgtgctgttccccgccgcgttcgccgccgacggacagatgcgcgtgtccacc
cgcttcggcgatttcccgcactggatgccggacggcccggtggccgacccggaggcgctg
ttcaccggctggatgctgttgtcctaccgcaagccggccaccgcctcgtctaccctggac
ggcttcgccgccgaccgcgccaccgacgaggacccgcgcagctactgggtggccgcacgc
aacacgcccggcgagaccctcaccgtggacctgggcggggaacgcagcgtgcgcgcggtg
caggtcaacttcgccgactacggtgccggccgctacggcgatgcgcctgacatctacacc
gcgttccggctgcagcactcgcgcgacggccgccactggctgccgctggccgaggtcggc
gacggcaccgaccgccgcgaccggcccaacgcctacctgcaattgcccgcgccggtgcac
acccgctacatccgctacgtgcacggccacgtcggcgccgcccacctggcgatcagcgac
ctgcgcgtattcggcaacgccgacggcgccccgccgccggcgccgaccggcgttgtcgcg
cagcgcgatgccgaccgccgcaatgcccgcgtgcactggcaggcggtgcccggcgccgtc
ggctacaacgtgcgctggggcctgcgcgccgaccgcctcaacctcacctaccaggtgttc
gccgaccgcggcaccgacctggagatccgggcgctgaaccgcgaccaggactacgtgttc
gccgtcgaagccttcgacgagcgcggtgtctccccgctgagcgcccgcatcgccgtgcca
tga
DBGET
integrated database retrieval system
