Xanthomonas sacchari: SB85_15910
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Entry
SB85_15910 CDS
T03566
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xsa03021
]
SB85_15910
Transcription machinery [BR:
xsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SB85_15910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_11
HTH_AsnC-type
KORA
HTH_3
HTH_10
Phage_terminase
GntR
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AJC47001
UniProt:
A0AA46STL7
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All DBs
Position
3891486..3892364
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AA seq
292 aa
AA seq
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MSQTLTSNALVANNLPIPSPLGSLDAYIGAVHQIPVLTSDEERALAVRYRDQEDLDAARE
LVHSHLRFVVHVARGYNGYGLPLGDLVQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAE
MHEYILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVTAVAKDLNVSEREVLEME
SRLSGRDIGFDAPSDEDDDHAPPSPAAYLMANEEDPSQAYERADSEDNQLQLLREGLAEL
DARSRDIIKRRWLDADSKITLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacgcttacttccaacgcattggttgccaacaacctcccgatccccagtccg
ctcggttcgctggatgcctatatcggcgccgtgcatcagatcccggtgctgacgtccgac
gaggaacgtgcactggcggtgcggtatcgcgaccaggaagacctggacgcggcccgcgaa
ctggtccattcccacctgcgcttcgtggtgcacgtggcccgcggctacaacggctacggc
ctgccgctgggcgatctggtccaggaaggcaacatcggtctgatgaaggcggtcaagcgc
ttcgacccggacatgggcgtgcgcctggtcagcttcgcggtgcactggatccgtgccgaa
atgcacgagtacatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcag
cgcaagctgttcttcaacctgcgcaagtccaagacccgcctgggctggatgaacgcggcc
gaggtcaccgccgtggccaaggacctcaacgtgtccgagcgcgaggtgctggagatggag
tcgcgcctgtccggtcgcgacatcggtttcgatgcgccgtccgacgaggacgacgaccac
gcgccgccgtcgccggccgcgtatctgatggccaacgaggaagatccctcgcaggcctac
gaacgcgccgacagcgaggacaaccagctgcagctgctgcgcgaaggcttggcggaactg
gatgcgcgttcgcgcgacatcatcaagcgccgctggctggatgccgacagcaagatcacc
ctgcaggaactggccgacgagtacggcgtgtcggccgagcgcatccgccagatcgaggcg
aacgcgctgaagaagatgaaggcgctgttcgtggcctga
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