Xanthomonas sacchari: SB85_15975
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Entry
SB85_15975 CDS
T03566
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xsa03032
]
SB85_15975
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_15975
Enzymes [BR:
xsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SB85_15975
DNA replication proteins [BR:
xsa03032
]
Prokaryotic type
DNA Topoisomerases
SB85_15975
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SB85_15975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AJC47011
UniProt:
A0AA46STJ2
LinkDB
All DBs
Position
complement(3908786..3911272)
Genome browser
AA seq
828 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIDKN
EKHVEAIAKAAKAAEDIYLATDPDREGEAISWHIAEILQERGLLKGKPLHRVVFTEITPR
AIKEAMAQPRQIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIAADCAHPSQHFNAKLIKLDGQKFEQFTITDGDTAEAARLRIQQ
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPSQVARFLTDDERKLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDNKSAEDEDEGRKLPAMKPGDRVPLERILAEQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTQYVDYDF
TAKLEDELDAVSRGEEEWVPLMSRFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEEALELFLMPRSLGQDQGE
EVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFPGSDI
QVLNGRFGPYISDGKLNGKIPKDREPASLSLDEVQKLLEETGKPVRKGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKAAKKTAKKAVKKAAKKTVAKGG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggatttccacgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaag
gaaggcgcagtggatccggacgacggcttcgcgatgcgctacgcgctgatcgacaagaac
gagaagcacgtggaggccatcgccaaggcggccaaggcggccgaagacatctacctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgcaggag
cgcgggctgctcaagggcaagccgctgcaccgggtggtgttcaccgagatcaccccgcgc
gcgatcaaggaagcgatggcgcagccgcggcagatcgccggcgacctggtcgacgcgcag
caggcccgccgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgta
gagcgcgaggaggagatcgaagccttcatcgcccgcgagtactggtccatcgccgccgac
tgcgcgcatccttcgcagcacttcaacgccaagctgatcaagctcgacgggcagaagttc
gagcagttcaccatcaccgacggcgacaccgccgaggccgcgcgcctgcgcatccagcag
gccgcgcagggcgcgctgcacgtcaccgacgtcgccagcaaggagcgcaagcgccgcccg
gcaccgccgttcaccacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtacgaaggcgtggcgatcggcgacgaa
ggcacggtcggcctgatctcgtacatgcgtaccgactcggtcaacctgtcgcaggacgcg
ctggccgagatccgcgacgtgatcgcccgcgactacggcatcgcctcgctgccggaccag
cccaacacctaccagaccaagtccaagaacgcccaggaagcgcacgaagcggtgcgtccg
acctcggcgctgcgtaccccgtcgcaggtggcccgcttcctgaccgacgacgagcgcaag
ctgtacgagctgatctggaagcgtgcggtggcctgccagatgattccggccacgctcaac
accgtcagcgtcgacctgtcggccggcagcgaacacgtgttccgcgccagcggtaccacc
gtggtggtgcccggcttcctggccgtgtacgaggaaggcaaggacaacaagagcgccgag
gacgaggacgaaggccgcaagctgccggcgatgaagcctggcgaccgcgtgccgctggaa
cgcatcctggccgagcagcacttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtaaaggcgctggaagagtacggcatcggccgtccctcgacctacgcctcgatcatccag
accctgctgttccgcaagtatgtggagatggaaggccgcagcttccgcccgtccgacgtc
ggccgcgcggtgtccaagttcctgtccagccacttcacccagtacgtggactacgacttc
accgccaagctcgaagacgagctggacgcggtctcgcgcggcgaggaggagtgggtcccg
ctgatgtcgcgcttctgggagccgttcaaggaactggtcgaggacaagaaggaatcggtc
gaccgcgccgaagccagcggtgcgcgcgagctcggcaccgatcccaagaccggcaagccg
gtgagcgtgcgcctgggccgcttcgggccgtacgcggcgatcggcagcaccgccgaggac
gccgaggacaagcccaagttcgcgtcgctgcgtcccggccagagcatgcacaccatcacc
ctggaggaggcgctggagctgttcctgatgccgcgcagcctcggccaggaccagggcgag
gaggtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcgtctacgcc
tcgctgaagaaggaagacgatccctacaccatcgatctggcccgtgcggtgttcctgatc
gaggagaaggaagagatcgcgcgcaaccgcatcatcaaggaatttcccggcagcgacatc
caggtactcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggatcgcgagcccgcctcgctgagcctggacgaagtgcagaagctgctggaggaa
accggcaagccggtgcgcaagggcttcggcgccaagaaggccgccgccaagaaggaagcc
gcgccgaagaagagcgcggcgaagaaggccgcggccgacgccccggccaagccggcggcg
aagaaggcggtcaagaaggccgcgaagaaaaccgccaagaaagcggtgaagaaggcggcg
aagaagaccgtggccaagggcggctga
DBGET
integrated database retrieval system
