Xanthomonas sacchari: SB85_16665
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Entry
SB85_16665 CDS
T03566
Name
(GenBank) endopolygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa00040
Pentose and glucuronate interconversions
xsa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SB85_16665
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
SB85_16665
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
AJC47129
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All DBs
Position
4094437..4095867
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AA seq
476 aa
AA seq
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MSKPVRVALVSGGVLAAAAFVSAAATGDSRHVVEPHLPPVCMALDATLQAQQRRFADAQE
RSAPDTARIQAALDRCAAGAHGAVLLRAGSGNAFLSGPLTIRSDTTLAIDSGVTLFASRQ
PADYQVPGRNACGQAAARSGGCRALIALQGRSLGVMGVRDGAGHQGTIDGRGDLPMLGGS
DSWWQFARGAKAAGQTQNAPDLIRAQDVADLQLYHVNLVNAPYFHVFVHGGDGVTVWGVR
VRAPANSPNTDGLDLDSVRNATLADNDVMAGDDGIAIKTSAARSADITVRDSRFYGTHGI
SIGSEVMYGVGNVLVDGNRLVGHDADGIVATDNNGLRIKTGLAKGGPVRDVLYRNTCLFD
VAKPLVITPQYGHDHGGSRSGSVPTFAGIVVDGLRAQDTPAGKGSTVQGYSAATPLELVL
AHVAADVATLHASNARIGVDQSDLRLSEDSSAASTYATTLAGSIPACSSAPVFPAL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcctgtgcgcgtcgcgctggtgtccggcggcgtcctcgccgccgctgcgttc
gtcagcgctgccgcgaccggcgattcccgtcacgtggtcgaaccgcacttgccgccggtg
tgcatggcgctggacgccaccctgcaggcgcagcagcgccgcttcgccgacgcgcaggag
cgcagcgcgccggacactgcgcgcatccaggccgcgctcgaccgctgcgccgccggtgcg
cacggcgcggtgctgctgcgcgccggcagcggcaatgccttcctcagcggaccgttgacg
atccgcagcgacaccacgctggcgatcgacagcggcgtgaccctgttcgcctcgcgccag
cccgccgactaccaggtgcctggccgcaacgcctgcggccaggccgcggcccgcagcggc
ggctgccgcgcgctgatcgccctgcaggggcgcagcctgggggtgatgggcgtgcgcgac
ggcgccggccaccagggcactatcgacggccgcggcgacctgccgatgctcggcggcagc
gacagctggtggcagttcgcgcgcggcgccaaggccgccggccagacccagaacgcgccc
gacctgatccgcgcgcaggacgtcgccgatctgcagctctaccacgtcaacctggtcaac
gcgccgtacttccacgtcttcgtgcacggcggcgacggcgtcaccgtgtggggcgtgcgg
gtccgggcgccggccaacagccccaacaccgacggcctggatctggacagcgtgcgcaat
gcgaccctggccgacaacgacgtgatggccggcgacgacggcatcgcgatcaagaccagc
gccgcgcgctcggccgacatcaccgtgcgcgactcgcgcttctacggcacccacggcatc
tccatcggcagcgaggtgatgtacggcgtcggcaacgtgctggtggacggcaatcgcctg
gtcggccacgacgccgacggcatcgtcgccaccgacaacaacggcctgcgcatcaagacc
ggcctggccaagggcggaccggtgcgcgacgtgctctaccgcaacacctgcctgttcgat
gtggccaagcccctggtgatcacaccgcagtacggccacgaccacggcggcagccgcagc
ggcagcgtgccgaccttcgccgggatcgtggtcgacggactgcgcgcgcaggacacgccc
gccggcaagggcagtacggtgcagggctacagcgccgcgacaccgctcgagctggtgctg
gcgcacgtggccgccgatgtcgccacgctgcatgccagcaatgcgcgcatcggcgtggac
caatccgacctgcgcttgagcgaggacagcagcgcggcctcgacctatgcgaccacgctc
gccgggtcgattccagcctgcagcagcgcgccggtgttcccggccctgtag
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