Xanthomonas sacchari: SB85_17045
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Entry
SB85_17045 CDS
T03566
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SB85_17045
Enzymes [BR:
xsa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SB85_17045
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AJC47729
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All DBs
Position
complement(4183848..4185452)
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AA seq
534 aa
AA seq
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MPCLLRLLLCCLALYAAAPALANAADFGVARVGDRFVVDSGADLQFSVDAHTGDVVSLRY
RGVELESPEAKHSQIASGLGSARVAARTVGDTIVVSASAGDLVQYYMARKGRDALYLATY
APTLLPVGELRFIARLDAAKLPDAEREPDSNVGTAIEGKDVFLLPDGRTSSKFYSARRAI
DDSVHGVSGPGLAVRMWMGDREHSAGGPFFKDIATQRTARTHELYNYMFSNHTQTEPYRG
GLHGVYVLQFSRGGAEAQVPPDLRFVDASLGLQGFLGAEARGAMAGQVSGIDAGQPAVVA
LRNAQAQYWARADADGRFRIAGIRPGAYRIALYRNELEVAHDTVQIAAAGTTQAELHAMP
LPGQVIWQIGDPDGTPAGFRNAALLARAHPSDRRMAPWGPLTYRVGHDRLDAFPAAQWRG
VNTPTRIAFVLGSDQVHAYRLRLFVTLTQAGGRPQLRVNERWSGPVPPRPEQPDSRGITR
GTYRGNNAVYLFDIPASALQAGLNTLDIDVASGSPDNGFLGPGIVFDSVQWLAP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcttgcttcgcctgctgctgtgctgcctcgccctgtacgccgcggcacccgcg
ctggcaaacgcagccgatttcggcgtcgccagggtcggcgatcgcttcgtcgtcgacagc
ggcgccgatttgcagttcagcgtggacgcccacaccggcgacgtggtctccctgcgttac
cgcggcgtcgaactggagagtccggaagccaagcactcgcagatcgcctcgggcctgggc
agcgcccgcgtcgccgcacgcaccgtcggcgacaccatcgtggtctcggccagcgctggc
gacctggtgcagtactacatggcgcgcaagggccgcgacgcgctctacctggccacctat
gcgccgaccctgctgccggtcggcgaactgcgcttcatcgcccggctcgacgcggcgaag
ttgcccgacgccgaacgcgagccggattccaacgtcggtaccgcgatcgagggcaaggac
gtattcctgctgccggacggccgcacaagctccaagttctactcggcacgacgcgcgatc
gacgacagcgtacatggcgtcagcggccccggcctcgccgtgcggatgtggatgggcgat
cgcgaacacagcgcgggcgggccgttcttcaaggacatcgccacgcagcggaccgcgcgc
acccacgagctgtacaactacatgttctccaaccacacccagaccgaaccctaccgcggc
ggcctgcacggggtgtacgtgctgcagttcagccgcggcggcgcggaagcgcaggtgccg
ccggacctgcgcttcgtcgacgcgtcgctgggcttgcaaggctttctgggcgcggaagcg
cgcggtgcgatggccggccaggtctccggcatcgacgcagggcagccggcagtggtggcc
ctgcgcaacgcgcaggcgcagtactgggccagggccgatgccgacggccgcttccgcatc
gccggcatccgccccggcgcgtaccgcatcgcgctgtaccggaacgagctggaggtggcc
cacgacacggtgcagatcgcagccgcgggcaccacacaggccgagctgcacgcgatgccg
ctgccgggccaggtgatctggcagatcggcgatcccgatggcacgccggccggtttccgc
aacgccgcgttgctggcgcgcgcgcatccctccgaccggcgcatggcgccatggggaccg
ctgacctatcgcgtgggccacgaccgtctcgacgcattccccgcagcgcaatggcgcggc
gtcaacacgcccacccgcatcgccttcgtgctcgggtcggaccaggtccacgcctaccgc
ctgcgtctgttcgtcaccctgacccaggccggcggccgtccgcagctgcgggtgaacgag
cgctggagcggacccgtgccgccgcggccggagcagccggacagccgcggcatcacccgc
ggcacctaccgcggcaacaacgccgtctatctgttcgacattccggccagcgcgctgcag
gccggcctcaacacgctggacatcgacgtcgcctcgggctcgccggacaacggtttcctc
ggcccgggcatcgtcttcgacagcgtgcaatggctcgcgccgtga
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