Xanthomonas sacchari: SB85_18405
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Entry
SB85_18405 CDS
T03566
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xsa02000
]
SB85_18405
Transporters [BR:
xsa02000
]
Other transporters
Pores ion channels [TC:
1
]
SB85_18405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
Motif
Other DBs
NCBI-ProteinID:
AJC47778
LinkDB
All DBs
Position
unnamed:complement(28214..33883)
Genome browser
AA seq
1889 aa
AA seq
DB search
MGFNAKALHDSGVAIGNAADASGEKSIAIGNAAAASSEKSIAMGYGATSAGDSGIAIGND
ADASGDNAVALGKDATAAQAGAVALGSGSSTAEAVATTGGTLNGTAYTYAGAAPDSTVSV
GSAGNERTVTNVAAGRVSGTSTDAVNGSQLYATNTELGKVGTAVTSIQEGAGVKYAHTNS
TGADSTASGTDSSAMGPAASAYGDSAVALGNGAVAGDANDSAVANAVALGNQAKAQGGSS
IAMGFKASSSGSSGIAIGNAAAASGNKSIAMGYEADASGDRSIAMGYDAATSSDKSIAMG
YAANANGGASIAMGYTAKSTASSGIAIGNAAAASSEKSIAMGYGATSAGGSAVALGEDAT
AAQAGAVALGSGSSTAAAVATTGGTLNGTAYTYAGTNPGSTVSVGSAGHERTVTNVAAGR
VSGTSTDAVNGSQLYATNTELGKVGTAVNSIQQGAGVKYAHTHSTKADSTASGTDSSAMG
PAANAYGDSAVALGNGAVAGDANDSAVANAVALGKAATASGGDSLALGAGAAAAQAGAVA
LGSGSSTAAAVATTGGTLNGTAYTYAGTNPGSTVSVGSAGHERTVTNVAAGRVSGTSTDA
VNGSQLYATNTELGKVGTKVDELDNTVQQFQNGNTVRYVHTNSSGADSTATGADSTAVGA
AANAYGDSAVALGNGAVAGDANDSAVANAVALGKAATASGGDSLALGAGAAAAQAGAVAL
GSGSSTAEAVATTGGTLNGTAYTYAGAAPGSTVSVGSAGHERTVTNVAAGRVSGTSTDAV
NGSQLYATNTELGKVGTAVNSIQEGAGVKYAHTNSTGADSTASGTNSSAMGPAASAYGDS
AVALGNGAVAGDANDSAVANAVALGKAATASGGDSLALGAGAAAAQAGAVALGSGSSTAA
AVATAGGTLNGSAYTYAGTNPGSTVSVGSAGHERTVTNVAAGRVSGTSTDAVNGSQLYAT
NTELGKVGTAVNSIQEGAGVKYAHTHSTKADSTASGTDSSAMGPAASAYGDSAVALGNGA
VAGDANDPAVANAVALGKAATASGDNSLALGAGAAAAQAGAVALGSGSSTAAAVATTGGT
LNGSAYTYAGTNPGSTVSVGSAGHERTVTNVAAGRVSGTSTDAVNGSQLYATNTELGKVG
TKVDELDNTVQQFQNGNTVRYVHTNSSGADSTATGADSTAVGAAANAYGDSAVALGNSAV
AGDANDSAVANAVALGKAATASGGDSLALGAGAAAAQAGAVALGSGSSTAAAVATTGGTL
NGSAYTYAGTNPGSTVSVGSAGHERTVTNVAAGRVSGTSTDAVNGSQLYATNTELGKVGT
KVDELDNTVQQFQNGNTVRYVHTNSSGADSTATGADSTAVGAAATAYGDSAVALGDGAVA
GDANDPAVANDVALGKAAAASGGDSLALGAGAAAAQAGAVALGSGSTTAAAVATTGGTLN
GTAYTYAGAAPTSTVSVGSAGHERTVTNVAAGRVSETSTDAVNGSQLYATNTELSKLDGA
VKGIQGGDGVKYLRVNSTGSDSVATGTDSVAIGPDAVASNAKDVAIGSGTRTVETTAVSS
TTLGGSSYNFAGSAPVGAFSVGAVGAERQIQNVAAGRLSASSTDAVNGSQLYATNQKVQD
NSNSLSTLQSSLTTLEQSIGGISGNPSKSGSGSVSPASDGSNGSNGSNGSSASSATNDGL
VVVGNDGTSVAVGPTASAKSASTTAMGSNTTASGTNATAVGADAVASGAGSVAVGKGATA
TESNSVAMGQGSVADRADTVSVGSASNQRQITNVAAGTERTDAVNLGQLQDGLDSVEDWS
RAYTDSRVDQVDRRASAGVAAAMAMASLPQAYQPDQSAAGVSLSSFRGEQAIAFGVSTIS
GSGRYLFKVNASATTRGDAGVAVGAGVVW
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcaatgctaaagccctacacgacagcggcgtcgccatcggcaatgccgccgat
gccagcggcgagaagagcatcgccatcggcaatgccgccgctgccagcagcgagaaaagc
atcgccatgggctacggggccacttccgcaggtgacagcggcatcgccatcggcaatgac
gccgatgccagcggcgacaacgccgtggcgctgggcaaggatgcgacggcggcgcaggcc
ggcgccgtggcgctgggcagcggcagcagcacggccgaggcggtggcgaccaccggcggg
accctcaacggcaccgcctacacctacgccggcgctgcgccggacagcacggtgagcgtg
ggcagcgccggcaacgagcggacggtgaccaacgtggccgccggccgcgtgtccgggacc
agcaccgacgcggtcaacggctcgcagctgtatgccaccaataccgaactgggcaaggtc
ggcaccgccgtcaccagcattcaggaaggcgcaggcgtgaaatacgcccacaccaactcg
accggggccgacagcactgccagcggtaccgacagcagcgcgatggggccggcggcgagt
gcgtacggcgacagcgcggtggcactgggcaatggcgcggtggcgggcgatgcgaacgat
tcggccgtggccaacgccgtggcgctgggcaaccaagccaaggcccaaggcggctccagc
atcgccatgggcttcaaggctagttcctcaggcagcagcggcatcgccatcggcaatgcc
gccgctgccagcggcaataaaagcatcgccatgggctacgaggccgatgccagcggcgat
agaagcatcgccatgggctacgatgccgctaccagcagcgataaaagcatcgccatgggc
tacgccgccaatgccaatggcggcgccagcatcgccatgggctacacggctaaatccaca
gcctccagcggcatcgccatcggcaatgccgccgctgccagcagcgagaaaagcatcgcc
atgggctacggggccacttccgcaggcggcagcgccgtggcgctgggcgaggatgcgacg
gcggcgcaggccggcgcggtggcgctgggcagcggcagcagcacggccgcggcggtggcg
accaccggcgggaccctcaacggcaccgcctacacctacgccggcaccaacccgggcagc
acggtgagcgtgggcagcgccggccacgagcggacggtgaccaacgtggccgccggccgc
gtgtccgggaccagcaccgatgcggtcaacggctcgcagctgtatgccaccaataccgaa
ctgggcaaggtcggcaccgccgtcaacagcattcagcaaggcgcgggcgtgaaatacgcc
cacacccactcgaccaaggccgacagcactgccagtggtaccgacagcagcgcgatggga
ccggcggcgaacgcgtacggcgacagcgcggtggcactgggcaatggcgcggtggcgggc
gatgcgaacgattcggccgtggccaacgctgtggcactgggcaaggcggccacggccagc
ggcggcgacagcctggcgctgggtgcaggcgcagcggcggcgcaggccggcgcggtggcg
ctgggcagcggcagcagtacggccgcggcggtggcgaccaccggcgggaccctcaacggc
accgcctacacctacgccggcaccaacccgggcagcacggtgagcgtgggcagcgccggc
cacgagcggacggtaaccaacgtggccgccggccgcgtgtccgggaccagcaccgatgcg
gtcaacggctcgcagctgtatgccaccaataccgaactgggcaaggtcggcaccaaggtg
gacgagctcgacaacacggtgcagcagttccagaacggcaacacggtgagatacgtccat
accaattccagcggtgcggacagcaccgccactggtgccgacagcaccgcggtgggagcg
gcggcgaacgcgtacggcgacagcgcggtggcactgggcaatggcgcggtggcgggcgat
gcgaacgattcggccgtggccaacgccgtggcgctgggcaaggcggccacggccagcggt
ggcgacagcctggcgctgggcgcaggcgcagcggcggcgcaggccggcgcggtggcgctg
ggcagcggcagcagcacggccgaggcggtggcgaccaccggcgggaccctcaacggcacc
gcctacacctacgccggcgctgcgccgggcagcacggtgagcgtgggcagcgccggccac
gagcggacggtgaccaacgtggccgccggccgcgtgtccgggaccagcaccgatgcggtc
aacggctcgcagctgtatgccaccaataccgaactgggcaaggtcggcaccgccgtcaac
agcattcaggaaggcgcgggcgtgaaatacgcccacaccaactcgaccggggccgacagc
actgccagcggtaccaacagcagcgcgatggggccggcggcgagtgcgtacggcgacagc
gcggtggcactgggcaatggcgcggtggcgggcgatgcgaacgattcggccgtggccaac
gccgtggcgctgggcaaggcggccacggccagcggcggcgacagcctggcgctgggcgca
ggcgcagcggcggcgcaggccggcgcggtggcgctgggcagcggcagcagcacggccgcg
gcggtggcgaccgccggcgggaccctcaacggcagcgcctacacctacgccggcaccaac
ccgggcagcacggtgagcgtgggcagcgccggccatgagcggacggtgaccaacgtggcc
gccggccgcgtgtccgggaccagcaccgatgcggtcaacggctcgcagctgtatgccacc
aataccgaactgggcaaggtcggcaccgccgtcaacagcattcaggaaggcgcgggcgtg
aaatacgcccacacccactcgaccaaggccgacagcactgccagcggtaccgacagcagc
gcgatgggaccggcggcgagtgcgtacggcgacagcgcggtggcactgggcaatggcgcg
gtggcgggcgatgcgaacgatccggccgtggccaacgccgtggcactgggcaaggcggcc
acggccagcggcgacaacagcctggcgctgggtgcaggcgcagcggcggcgcaggccggc
gccgtggcgctgggcagtggcagcagcacggccgcggcggtggcgaccaccggcgggact
ctcaacggcagcgcctacacctacgccggcaccaacccgggcagcacggtgagcgtgggc
agcgccggccatgagcggacggtgaccaacgtggccgccggccgcgtgtccgggaccagc
accgatgcggtcaacggctcgcagctgtatgccaccaataccgaactgggcaaggtcggc
accaaggtggacgagctcgacaacacggtgcagcagttccagaacggcaacacggtgaga
tacgtccataccaattccagcggtgcggacagcaccgccactggtgccgacagcaccgcg
gtgggagcggcggcgaatgcgtacggcgacagcgcggtggcactgggcaatagcgcggtg
gcgggcgatgcgaacgattcggccgtggccaacgccgtggcactgggcaaggcggccacg
gccagcggcggcgacagcctggcgctgggtgcaggcgcagcggcggcgcaggccggcgcg
gtggcgctgggcagcggcagcagcacggccgcggcggtggcgaccaccggcgggaccctc
aacggcagcgcctacacctacgccggcaccaacccgggcagcacggtgagcgtgggcagc
gccggccatgagcggacggtgaccaacgtggccgccggccgcgtgtccgggaccagcacc
gatgcggtcaacggctcgcagctgtatgccaccaataccgaactgggcaaggtcggcacc
aaggtggacgagctcgacaacacggtgcagcagttccagaacggcaacacggtgagatac
gtccataccaattccagcggtgcggacagcaccgccactggtgccgacagcaccgcggtg
ggagcggcggcgaccgcgtacggcgacagcgcggtggcactgggcgatggcgcggtggcg
ggcgatgcgaacgatccggccgtggccaacgacgtggcactgggcaaggcggccgcggcc
agcggcggcgacagcctggcgctgggtgcaggcgcagcggcggcgcaggccggcgccgtg
gcgctgggcagcggcagcaccacggccgcggcggtggcgaccaccggcgggaccctcaac
ggcaccgcctacacctacgccggcgccgcgccgaccagcacggtgagcgtgggcagcgcc
ggccacgagcggacggtgaccaacgtggccgccggccgcgtgtccgagaccagcaccgat
gcggtcaacggctcgcagctgtatgccaccaacaccgagctaagcaagctcgacggtgca
gtcaagggtatccagggcggcgacggtgtgaagtacctgcgggtcaattcgacgggcagc
gatagcgtcgcgaccggcaccgacagcgtcgcgatcggccccgatgcggtcgccagcaat
gcgaaggacgtggcgatcggctcgggtactcgtaccgtggagaccacggcggtgagttcc
acaacgctcggtggctccagctacaacttcgccggcagcgcgccggtcggtgcgttcagt
gtcggcgcggtgggggcggagcggcagattcagaatgtggccgcaggccgtctgagcgcc
agcagcaccgatgcggtgaacggttcgcagctgtatgccacgaatcagaaggtgcaggac
aactccaattcgctctccacgctacagagttcgctgaccacgctcgagcagtccattggc
ggcatctccggaaatcccagcaaaagcggcagcggcagcgtcagccccgccagcgatggc
agcaatggcagcaatggcagcaacggttcgagcgcctcatcggcgacgaacgatgggttg
gtcgtcgtgggcaatgacggcacctcggtcgcggttgggcctactgcgtcggccaagagc
gccagcaccacggcgatgggcagcaacaccacggccagtggcacgaacgcgacggcggtg
ggggcggatgcggtcgcatcaggtgcgggtagcgttgccgtaggcaaaggcgccactgcc
acggagtccaacagcgttgccatggggcagggctcggtcgccgaccgtgccgacaccgtc
tcggtcggttcggcgagcaaccagcgccagatcaccaacgtcgccgccggcaccgaacgc
accgatgcggtcaacctgggacagttgcaggatggcttggacagcgtagaggactggtcg
cgcgcctacaccgactcccgcgtggatcaggtggatcggcgcgccagcgccggcgtggcc
gcggcgatggcgatggccagcctgccccaggcgtatcaaccggaccagagcgcggcgggc
gtctcgttgagctcgttccgtggcgaacaggcgatcgcgttcggcgtttccacgatcagc
ggaagcggccgctacctgttcaaggtcaacgccagcgccaccacgcgcggcgatgccggc
gtggccgtcggcgcgggtgtggtctggtaa
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