Xanthomonas sacchari: SB85_18825
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Entry
SB85_18825 CDS
T03566
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SB85_18825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xsa03000
]
SB85_18825
03400 DNA repair and recombination proteins [BR:
xsa03400
]
SB85_18825
Enzymes [BR:
xsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SB85_18825
Transcription factors [BR:
xsa03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SB85_18825
DNA repair and recombination proteins [BR:
xsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SB85_18825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
HTH_23
CobS_N
Motif
Other DBs
NCBI-ProteinID:
AJC47845
LinkDB
All DBs
Position
unnamed:129019..130491
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AA seq
490 aa
AA seq
DB search
MPALAATDHALYDRARQSRDARFDGVFFTAVRSTGIYCRPVCPAPPPKRSNVRYYPSAAA
AAAAGYRPCLRCRPELSPEAQQHLGEEVVRRALALIAEGALQDASVAALAAELGISARQL
QRLFVAQLGATPAAVHATRRLLLAKQLLTETALPITQVALAAGFNSLRRFNAAFLDGCGM
PPSAIRKQRTDSPGGDLVLRLGYRPPLDFPAMLAFLRKRAIPGIERIGEASYERVLGPCE
ASTRIRVEADPQRHELHLHIAAADPRAIPDIVRRVRRVFDLDADLRAVHATLGDDPLLAR
AIARRPGLRVPGGWDGFEVAVRAVLGQQVSVAGAATLAARLVDRHGAARPGQPPGLDRAF
PTPQALRDAPLEAIGLPRSRAATIRALAQAVLDGRLSFRAGQRLDDFVAHAITLPGIGAW
TAQYIALRALGQPDAFPAGDLVLQRMLGADGARLSERATEARAQAWRPWRAYAVLHLWHL
ANDPPEEIRA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccctcgccgccaccgaccacgccctctacgaccgcgcccgccagtcccgcgac
gcgcgcttcgacggcgtgttcttcaccgccgtgcgcagcaccggcatctactgccggccg
gtgtgcccggcgccgccgcccaagcgcagcaacgtgcgctactaccccagcgccgccgcg
gccgcggcggccggctaccggccgtgcctgcgctgccgccccgaactctcgccggaggcg
cagcagcacctgggcgaagaggtcgtgcggcgcgcactggcgctgatcgccgagggcgcg
ctgcaggacgccagcgtcgccgcgctggcggccgaactgggcatcagcgcgcgtcagctg
cagcgcctgttcgtggcccagctcggcgccaccccagcagcggtgcacgcgacccggcgc
ctgttgctggccaagcaactgctcaccgaaaccgcgttgccgatcacccaggtggcgctg
gcggccggcttcaacagcctgcgccgcttcaacgccgccttcctcgacggctgcggcatg
cccccctcggcgatccgcaagcagcgcaccgacagtcccggcggcgatctggtgctgcgc
ctgggctatcggccgccgctggacttcccggcgatgctggcgttcctgcgcaagcgcgcg
atccccggcatcgagcgcatcggcgaggccagctacgagcgcgtgctcggcccctgcgag
gcctccacccgcatccgtgtcgaggccgatccgcagcgccacgaactgcacctgcacatc
gccgcggccgatccgcgcgccattcccgacatcgtgcgccgggtgcgccgcgtattcgac
ctggatgccgacctgcgcgcggtgcacgccacgctcggcgacgatccgctgctggctcgc
gcgatcgcccggcgccccggattgcgtgtgccgggcggctgggacggcttcgaagtggcg
gtgcgcgcggtgctcggccagcaggtcagcgtggccggcgcagcgaccctggccgcgcgc
ctggtggatcggcacggcgccgcgcggcccggccagccgccggggctggaccgcgccttc
ccgaccccgcaggcactgcgcgacgcgccgctggaagcgatcggcctgccgcgctcgcgt
gcggcgacgatccgtgcgctggcgcaggcggtgctggacggccgtctgtcgttccgtgcc
ggccagcgcctggacgacttcgtcgcccacgccatcaccttgcccggcatcggcgcctgg
accgcgcagtacatcgccctgcgcgcgctcggccagcccgacgccttcccggccggcgac
ctggtcctgcagcgcatgctcggcgcggacggcgcacgcctgagcgaacgcgccaccgag
gcgcgcgcgcaggcctggcgtccctggcgcgcctacgcggtgctgcacctgtggcacctg
gccaacgaccctcccgaggagatccgcgcatga
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