Xanthomonas sacchari: SB85_18855
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Entry
SB85_18855 CDS
T03566
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xsa02000
]
SB85_18855
Transporters [BR:
xsa02000
]
Other transporters
Pores ion channels [TC:
1
]
SB85_18855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AJC47850
LinkDB
All DBs
Position
unnamed:135106..137178
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AA seq
690 aa
AA seq
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MPSPRPVLLRRSALSLALLGLLSPSLALAADPTTATTATDATPPASDSRHGAGHRQDRHV
KDMDQVVVTASPLRDAAGALSQPVDVLAGERLDENRGASIGETVASLPGVQSSNFGPGVG
RPIIRGLDGPRVAVLNDGLSSQDVSTVSQDHSPAVEPFLADQIEVLKGPSTLLYGSGAIG
GVVNVVDGRIAETPVDGVHGRAEARWEGGDKSGNTDMFRVDAGNGSGLSIHADGVYRNLK
DYDTPQGPQLNSFVKSKVGSIGSSLAGDWGFVGVSISRFRDNYGNPGEPGDPAAGERGVS
LQLHQDRFELKGALNDPWGDGSALRYSFGHTAYTHTEFEGAEVGTKFDKRANEGRVEASF
GLGGGWQTAVGVQGSDSTFQATGEEAFVPKTDTRAIGVFALARNTWDRVQAEVGARVDRT
KYETDTGVDRDFTPKSLSLSGGFRFNEQWRLTANLDHAERAPAEEELFANGPHIATLAYE
IGNPDLKTEKANQAELGLIFKNDWVDAKVAGYYNRYDDFIYIVDTGGQWFHEEDNDFLPI
RQWTQADAVFHGFEGEATFHLANNDSGAWDLRVFGDTVRARLKDGGNLPRIAPARYGAQL
RWDASNWRAALGATRYQKQDKVAVNETPTAGYTLVDAHLAYHVDAGSTAWEVFLDGNNLT
NQDARVHTSFLKDDVMLPGRSASFGVRLFF
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgccctctccccgtcccgtcctgctccgccgttccgccctgtccctggccctgcttggc
ctgctgagcccgtcgctggccctggccgccgacccgaccaccgcgacgaccgcgaccgac
gccacgccgcctgccagcgacagccgccacggcgcaggccacaggcaggaccgacacgtg
aaggacatggaccaggtggtggtcaccgccagcccgctgcgcgatgccgccggtgcgctg
agccagccggtggacgtgctggccggcgagcgcctggacgagaaccgcggcgccagcatc
ggcgagaccgtggccagcctgccgggcgtgcagagctccaacttcggccccggcgtgggc
cggccgatcatccgcggcctcgacggcccgcgcgtggcggtgctcaacgacggcctgtcc
tcgcaggacgtgtccacggtcagccaggatcattcgcctgccgttgagccgttcctggcc
gaccagatcgaagtgctgaagggtccgtccaccctgctgtacggctccggtgcgatcggc
ggcgtggtcaacgtggtcgacgggcgcatcgccgagaccccggtcgacggcgtgcacggt
cgtgccgaagcgcgctgggaaggcggcgacaagagcggcaacaccgacatgttccgcgtc
gatgccggcaacggcagcggcctgtcgatccatgccgacggcgtgtaccgcaacctgaag
gactacgacacgccgcagggcccgcagctcaactcgttcgtcaagtccaaggtcggctcg
atcggcagttcgctggccggcgactggggcttcgtcggcgtgtcgatctcgcgcttccgc
gacaactacggcaaccccggcgagcccggcgatccggccgccggcgagcgcggcgtgtcg
ctgcagctgcaccaggaccgtttcgagctcaagggtgcgctgaacgacccgtggggcgac
ggcagcgcactgcgctacagcttcggccacaccgcctacacccacaccgagttcgaaggc
gcggaagtgggcaccaagttcgacaagcgcgccaacgaaggccgcgtggaggcctccttc
ggcctgggcggcggctggcagaccgcggtcggcgtgcagggcagcgactcgaccttccag
gccaccggcgaagaagccttcgtgccgaagaccgacacccgcgccatcggcgtgttcgcg
ctggcgcgcaacacctgggaccgcgtgcaggccgaggtcggcgcgcgcgtggacaggacc
aagtacgagaccgacaccggcgtggaccgcgatttcactccgaagagcctgtcgctgagc
ggcggcttccgcttcaacgagcagtggcgtctgaccgccaacctcgaccacgccgagcgc
gccccggccgaagaagagctgttcgccaacggtccgcacatcgccaccctcgcctacgag
atcggcaaccccgacctgaagaccgagaaggccaaccaggccgaactgggcctgatcttc
aagaacgactgggtcgacgccaaggtggccggctactacaaccgctacgacgacttcatc
tacatcgtcgacaccggcggccagtggttccacgaggaagacaacgatttcctgccgatc
cgccagtggacccaggccgatgcggtgttccatggtttcgagggcgaggccaccttccac
ctggccaacaacgacagcggcgcctgggacctgcgcgtgttcggcgacaccgtgcgcgca
cgcctgaaggacggcggcaacctgccgcgcatcgcgccggcgcgctacggcgcgcagctg
cgctgggacgcgagcaactggcgcgccgcgctgggcgccacccgctaccagaagcaggac
aaggtggcggtcaacgagacgcccaccgccggctacaccctggtcgatgcgcatctggcc
tatcacgtcgatgccggcagcaccgcctgggaagtgttcctggacggcaacaacctgacc
aaccaggatgcgcgcgtgcatacctcgttcctcaaggacgacgtcatgctgcccggccgc
agcgcctcgttcggcgtgcgcctgttcttctga
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