Xanthomonas sacchari: SB85_18910
Help
Entry
SB85_18910 CDS
T03566
Name
(GenBank) Fis family transcriptional regulator
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
xsa
Xanthomonas sacchari
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xsa03016
]
SB85_18910
Enzymes [BR:
xsa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SB85_18910
Transfer RNA biogenesis [BR:
xsa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SB85_18910
Prokaryotic type
tRNA splicing ligases
SB85_18910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AJC47860
LinkDB
All DBs
Position
unnamed:complement(150719..151939)
Genome browser
AA seq
406 aa
AA seq
DB search
MNTEQYDVIAQPGAAPIKLWTRGVPLEDEARQQLQNIAKLPFIHRWIAVMPDVHLGKGAT
VGSVVPTIGAIVPAAVGVDIGCGMIAARTSLVASDLPDNLAPIRSAIERAVPHGRTPGAR
DKGAWQTPPGAAVDGWAQLASDFALICERHPRLRKTNNLQHLGTLGTGNHFVEMCLDEAQ
RVWFMLHSGSRGVGNAIGNHFIQLAKEEMRRWMINLPDQDLAYLPEGSQYYGDYVFAVDW
AQRYARINREIMMRSVVEAVRTVIAKPFEAQAEAVNCHHNYVSREHHFGKDVFVTRKGAV
SARKGELGIIPGSMGAKSFIVRGLGNADSFHSCSHGAGRVMSRTEARRRISVDEHVKATA
HVECRKDQDVVDESPAAYKPIEAVMAAQRDLVEIVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgagcagtacgacgtcatcgcgcagccgggagcggcgccgatcaagctgtgg
acccgtggcgtgccgctggaggacgaggcgcgccagcagctgcagaacatcgccaagctg
cccttcatccatcgctggatcgcggtgatgccggacgtgcacctgggcaagggcgcgacc
gtcggctcggtggtgccgaccatcggcgcgatcgtgcctgccgcggtgggtgtggacatc
ggctgcgggatgatcgccgcgcgcacctcgctggtcgccagcgatctaccggataacctg
gcgccgatccgcagcgcgatcgagcgcgcggtgccgcacgggcgcacgcccggcgcgcgc
gacaagggcgcgtggcagacgccgccgggcgcggccgtggacggctgggcgcaactggcc
agcgacttcgcgttgatctgcgagcgtcatccgcgcctgcgcaagaccaacaacctgcag
catctcggcaccctcggcaccggcaaccacttcgtcgagatgtgcctggacgaggcgcag
cgggtctggttcatgctgcactccggttcgcgcggcgtcggcaatgcgatcggcaaccac
ttcatccagctcgccaaggaggaaatgcggcgctggatgatcaacctgccggaccaggac
ctggcctatctgccggaaggcagccagtactacggcgactatgtgttcgcggtggactgg
gcgcagcgctatgcgcggatcaaccgcgagatcatgatgcgcagcgtggtcgaggcggtc
cgtacggtcattgccaagccgttcgaggcgcaggccgaggcggtgaactgccaccacaac
tacgtcagccgcgagcatcacttcggcaaggacgtgttcgtgacccgcaagggcgcggtg
agcgcgcgcaagggcgagctgggtatcattccgggcagcatgggcgccaagagcttcatc
gtgcgcgggctgggcaatgccgacagcttccacagctgcagccatggtgccggccgggtg
atgagccgcaccgaggcgcgtcgccgcatcagtgtcgacgagcacgtcaaggccaccgcg
catgtggagtgtcgcaaggaccaggacgtggtggacgagtcgccggcggcctacaagccg
atcgaggcggtgatggccgcgcagcgcgacctggtggagatcgtgcacacgctgcggcag
gtggtgtgcgtcaagggctag
DBGET
integrated database retrieval system
