Xenorhabdus stockiae: AB0856_000003
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Entry
AB0856_000003 CDS
T11396
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
xsk Xenorhabdus stockiae
Pathway
xsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB0856_000003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xsk03400
]
AB0856_000003 (recF)
DNA repair and recombination proteins [BR:
xsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB0856_000003 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
AAA_27
ABC_tran
AAA_29
AAA_16
AAA
AAA_13
Motif
Other DBs
NCBI-ProteinID:
YAP78868
LinkDB
All DBs
Position
2456..3586
Genome browser
AA seq
376 aa
AA seq
DB search
MILSRLLIRDFRNIANADLPLATGFNFLVGPNGSGKTSVLESIYTLGHGRAFRSIQAGRV
IRHDSEEFILHGRLEQQSHERTLSVGLSKNRQGDSKVRIDGSDGHKIAELAKMLPMQLIT
PEGFTLLNGGPKYRRAFIDWGCFHNEPRFFAGWANLKRLLKQRNAALRQVTRYSQIQHWD
HELAPLATQISQWRAEYIAGIAEDIEKTCKQFLPEFTLNISFQQGWDKESEYAELLARQF
ERDKALTYTASGPHKADLRIRADGTSVEDMLSRGQLKLLMCALRLAQGEYFTRQSGQKCL
YLLDDFASELDAGRRKLLAERLKSTQAQVFVSAITPEQVADMIDVNSRMFSVEHGKICPM
DFEFSQHSKGDSKDEG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattctctcgcgtttattgatccgcgattttcgtaatatcgccaatgctgacctgcca
ttggcgacgggctttaattttctggtcgggccgaatggcagcggaaaaacgagcgtactg
gaatccatttacacattaggtcacgggcgcgcttttcgcagcattcaggcgggaagagtc
attcgccatgatagtgaagagtttattcttcatggaagactggaacagcaatcccacgag
cgaacgttatccgtcgggctgagcaaaaaccgtcagggtgacagcaaagtcagaatagat
ggcagtgatgggcataaaattgcagagctggcgaaaatgctgccgatgcagcttatcact
ccggaaggttttacgttgttaaatggcggcccgaaataccggcgcgcttttatcgactgg
ggttgctttcataatgaaccgcgtttttttgctggctgggccaatctgaaaaggttgctc
aaacaacggaatgcggcattacggcaagtcacccgctatagccagatccagcattgggat
catgagcttgctccactggcaactcagataagccaatggcgggctgaatatattgcaggt
attgcggaagatattgagaaaacctgtaaacaatttttacctgaattcactctcaatatc
tcttttcagcagggctgggacaaagagagtgaatatgcagaactactcgcgcggcagttt
gagcgcgataaagcattaacctataccgcatccggcccccacaaggccgatctacggatc
agggcagacggcacatctgtagaggatatgctctctcgtggtcagcttaagttactgatg
tgtgctcttaggttagcgcagggtgaatatttcacccgacagagcgggcaaaaatgcctg
tatctgcttgatgattttgcctctgaattggatgccggccgtcgtaagttattagccgag
cgtctgaaatctacgcaggctcaggtgttcgtcagtgcaattacacccgagcaggttgca
gacatgattgacgtaaatagcaggatgtttagcgtagaacatggcaaaatatgccctatg
gatttcgaattcagccagcatagtaaaggtgattcgaaagacgaagggtaa
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