KEGG   Xenorhabdus stockiae: AB0856_000250
Entry
AB0856_000250     CDS       T11396                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
xsk  Xenorhabdus stockiae
Pathway
xsk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xsk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AB0856_000250 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xsk02044]
    AB0856_000250 (tssM)
Secretion system [BR:xsk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AB0856_000250 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical HisKA EABR DO-GTPase2
Other DBs
NCBI-ProteinID: YAP79107
LinkDB
Position
288691..292212
AA seq 1173 aa
MPRFKAAIALILALIPCVLLIAVWWWGPDLKIREDYPLESLAARWLATALIIMGVLGWIG
VKAWRRLRQLEKLNLDVELKVVDPVRMDIEYQDRYLDHWKSQLQRHLDSYNYLYERPWYM
VIGSQLSGKTSLIKEGYKLSEIAAPEYLRQDGDISLLLRCWLGEKAVIIDPKGRLIDQPV
PLNSDKPQINSRLWEALLNWLSENRQRQPLNGIILTVDTLRLMTDNREQRERYVREIHHR
LQEIRLTFHSQLPIYLVMTKIDLLHGFEAMYQSLDRKLRDQILGVTFSLNNRDEKAWRSE
LEQFWQQWMNNLNGAMPDMMLNGVDANQRSALFSFTRQIQGLYSYIVQMLEDILYNDENH
RPMLRGVYLTSAHQVGQMDDMFTQSASAQYHLGSQAFPTWPAGDTLPFFTQTLFEDVLLA
EPNLAAENRIWLSRNRRQLYTFSTVSALVVLAMWGGWHYFYQKNYRAGEEVLAEAKKFLS
VPAPTGDDNYGSLQLPLLNPIRDATLAYGNYHEKKSFLTDMGLYQGGLVGKKVENTYLNL
LEQKFLPSLMHVLLDDLNKAPAGSEEKLEILRVMRMMEDKSKRNEGLVAQYMRERWSKAF
YGQRDVQDALLTHLDYALAHTDWKDKRDKGEREAIDKFAPFAQPVRQAQQELSTLSVKQR
VYQNLRIKAQDTLPAPINLRDQIGPSFDSVFVAGNEKRLVIPQFLTRPGLMDYYVQQEEK
LVELTEMDSWVLNLSKNKELEQLKANNQYSGQDQKAIKQGIDELYLADYTATWRAAMNNL
EVRDFEDLPQAIGAIEQVISGEQPIKRALQILSDNTNPPMLDSSLSNTERKMLLDKRDYT
LLTSISRSFAQETGVLIDHGDKGSTLQSVYQKLMALHRYLLSIQNSPTPGKSALQAVQMR
LDKNNSDAIFEVQQMAKNLPEPLDRWIGELANQAWRVVMMEAVRSLEVEWQDTVVKQYNT
YLAGRYPFNPNAKEEVPLSEFERFFRPDGTLDAFYKQSLKPFVEHKLTMGTDGRTLIRPD
VLKQLENANRIRATFFSPQNGLGTQFAIEPVSLTGNKRRALLNLDGQLVDYTHGRSNVAR
LIWPNSMRAGTESKLTLMPDRSNQAPRSISYMGPWAQLRLINSGKLTNIQSGSFDVRFSV
DGGEMTYRIYVDESDNPFAGGLFSHFKLPDTLY
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgccgcgttttaaggcagcgatagcgctcattctggcgcttattccctgcgtactgctt
atcgcagtctggtggtgggggcctgacctgaaaatccgtgaggattatccgctggaaagc
cttgccgcccgctggctggcgacagccctcatcattatgggagtactgggctggatcggt
gtgaaagcgtggcgtcgtctgcgtcagcttgaaaaactgaaccttgatgttgaattaaaa
gtggttgatccggttcgcatggatattgaatatcaggatcgttaccttgaccactggaaa
tctcagttacagcgccatctggattcttacaactacctatacgaacgcccgtggtacatg
gtgatcggtagccagctgagcggtaaaacctcgcttatcaaagaaggttataagctgtct
gaaatcgctgcgccggaatatttgcgtcaggatggggatatctccctgttattgcgttgc
tggctgggagaaaaagcggtcatcatcgacccgaaaggccgcctgattgaccagcctgtt
ccgctgaacagtgataaaccgcagatcaacagtcgtctgtgggaagccctgctgaactgg
ctgtcagaaaaccgccagcgccagccgcttaacgggatcattctgactgtggataccctg
cgtttgatgacggataaccgcgaacagcgtgagcgttacgtgcgggaaattcaccatcgt
ttgcaggaaattcgcctgactttccacagccagttgcctatctatctggtgatgaccaag
attgacttgttgcacggttttgaagcgatgtatcagtcactggatcgcaaactgcgtgac
caaattctgggtgtcactttcagcctcaacaatcgcgacgaaaaagcgtggcgcagtgag
ctggaacagttctggcaacagtggatgaacaacctgaacggagccatgccggatatgatg
ctgaacggcgttgatgctaatcagcgtagcgccctgttcagtttcacccgtcagattcag
gggttgtacagctatatcgtacagatgctggaagacattctgtacaacgatgaaaatcac
cgtccaatgctgcgcggtgtgtacctgacttccgcccatcaggtcgggcagatggatgac
atgttcactcagtcggcctcggcgcagtatcacctcggttctcaggcatttcctacatgg
cctgcgggagacactctgcctttctttacccagactctgttcgaagacgtgttactggcg
gagccgaatctggccgctgaaaaccgtatctggctgagtcgcaaccgtcgccagttatac
accttctccaccgtgagtgcgctggtcgtactggcaatgtggggtggctggcattacttc
tatcagaaaaactaccgtgctggagaagaagtactggcagaggcgaaaaaattcctctcc
gtaccggctccgacaggggatgacaattacggtagcctccagttgccactgttgaacccg
atccgtgacgcaacactggcttacggtaactaccatgagaaaaaatctttcctgacagat
atggggttatatcagggcggtctggtagggaaaaaagtggaaaacacttacctgaatctg
ctggagcaaaaattcctgccatccctgatgcacgtactgttggatgacctgaataaggca
cctgccggtagtgaggaaaaactcgaaatcctgcgtgtgatgcgcatgatggaagataaa
agcaaacgtaacgaaggattggtcgcgcagtatatgcgtgagcgctggagtaaggcgttc
tacggtcagcgtgatgtgcaggacgctttactgactcatctggattatgccttagctcat
acggactggaaggataaacgtgacaaaggagaacgggaagcgattgataagtttgcacca
tttgcacaacctgtccgacaggctcaacaagagctgagtacgctctccgttaaacagagg
gtttaccagaacctgcgtattaaggcacaggataccctgccagcacctatcaacctgcgt
gatcagattggcccgagctttgacagcgtgtttgtcgcgggtaacgaaaaacgactggtg
ataccacaatttctgacccgtcccggcctgatggattactacgtccaacaggaggagaag
ctggtagagctgaccgagatggatagctgggtgctgaatttatccaagaataaagagttg
gagcagttaaaggctaacaatcagtacagcggtcaggatcagaaggcgatcaagcaggga
atagatgagctgtatctggcagattacactgcaacatggcgcgctgcgatgaataatctc
gaagttcgtgactttgaggacttaccacaggctatcggtgctattgaacaggtgatcagt
ggtgagcagccgatcaaacgcgcgttacaaatcctgagcgataacaccaatcctccgatg
ctcgatagctcactgagcaatacggaaagaaaaatgttgttggacaaaagggattacaca
ctcttgaccagcatcagccgtagtttcgctcaggaaaccggtgtattgatcgatcatggc
gataaaggcagtacgctgcaaagtgtctatcagaaactgatggcactgcatcgttacctg
ctttccatccagaactcaccaacaccgggtaaatcagcacttcaggccgtgcagatgcgt
ctggataaaaacaacagtgatgcgatttttgaagtccagcagatggcgaaaaacctgcct
gaaccactggatcgctggatcggcgaactggcgaatcaggcatggcgcgtagtcatgatg
gaagcggtccgctcgctggaagtggaatggcaggatacggttgttaaacagtacaacacc
tatctggcaggccgttatccgttcaatccgaatgctaaagaagaagtcccgctaagcgag
tttgagcgattcttccgcccggacggcacgcttgatgctttctacaaacagagcctgaaa
ccatttgtggaacacaaactgacgatgggtactgatggtcgtacgcttatccgtccggat
gtgctgaaacagctggaaaatgctaaccgtatccgtgccactttcttctcaccacagaac
gggctgggcacacagtttgccattgagccagtcagcctgaccggtaacaaacgccgcgcc
ttgctgaaccttgatggacagctggtggattacacccacggacgcagcaacgttgcacgc
ctgatatggccgaactctatgcgtgcaggcacagaaagcaagctgaccctgatgccggac
agaagtaatcaggctccgcgctctatcagctatatggggccgtgggcgcaattgcggctg
attaacagcggcaagctgaccaatatccaatccggttcttttgatgtgcgcttcagcgtg
gatggcggcgagatgacctatcgcatctacgtggacgaatcagacaacccatttgccggt
gggctgttcagtcatttcaaactaccggacaccctctattga

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