Xenorhabdus stockiae: AB0856_000634
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Entry
AB0856_000634 CDS
T11396
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
xsk Xenorhabdus stockiae
Pathway
xsk00220
Arginine biosynthesis
xsk00240
Pyrimidine metabolism
xsk00250
Alanine, aspartate and glutamate metabolism
xsk01100
Metabolic pathways
xsk01110
Biosynthesis of secondary metabolites
xsk01240
Biosynthesis of cofactors
Module
xsk_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AB0856_000634 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AB0856_000634 (carB)
00220 Arginine biosynthesis
AB0856_000634 (carB)
Enzymes [BR:
xsk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AB0856_000634 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
BamE
Motif
Other DBs
NCBI-ProteinID:
YAP79472
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Position
complement(716709..719933)
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AA seq
1074 aa
AA seq
DB search
MAKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLQEFGVTMIGATA
DAIDKAEDRQRFDKAMKKIGLDTARSGIAHTMEEALAVAEDVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKSDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIP
RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGATGFDPKVNLDDVQS
LTKIRSELKDAGAERIWFVADAFRAGMSVDGIFNLTNIDRWFLVQIEELVRLEDMVAEQG
INGLTSGFLRQLKRKGFADARLAKLAGVSEKEIRKLRHDYGLYPVYKRVDTCAAEFSTDT
AYMYSTYEDECEANPNNDKPKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEQPKGVIVQYGGQTPLKLARELEAAGVP
IIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVTTIEQAIEKGNNLGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSKEIQDVMRNQVEKLAFELRVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGMPLAKVAARVMAGQSLQSQGVTKEIIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSNSIMGKKGRALLSVREGDKERVVDL
AAQLVKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYDYIVNTTAGR
QAIEDSKLLRRSALQYKVHYDTTLNGGFATTMALSADPTEQVISVQEMHAKITK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtactgatattaaaagtatcctgatcttgggtgcaggtccgattgttatc
ggtcaggcatgtgaatttgactactcaggtgctcaggcctgtaaagcgctgagagaagaa
ggttaccgtgtcatactggtgaactccaacccggcaaccatcatgaccgacccggaaatg
gctgatgcaacttacatcgagccgattcactgggaagtcgtacgcaaaatcattgagaaa
gaacgtccggatgccgtcctgccaacaatgggcgggcaaacagcactcaactgcgcactg
gaactggaacgtcagggtgtattgcaggaattcggtgtcaccatgattggtgcaaccgct
gatgccattgataaagcagaagatcgtcagcgttttgacaaagcgatgaagaaaatcggt
ctggataccgcgcgttccggcatcgctcataccatggaagaagcactggcagtcgctgaa
gacgtaggcttcccttgtatcatccgcccttctttcaccatgggtggaacaggcggtggt
atcgcttataaccgcgaagagtttgaagagatctgcgagcgcggtctggatctttctcca
acgaatgaactgctgatcgatgaatcgctgattggttggaaagagtatgaaatggaagtt
gttcgtgacaaaagtgacaactgcatcatcgtctgctccattgaaaactttgacgcgatg
ggtatccataccggtgactccatcactgtcgcaccagcccagactctgacggataaagaa
tatcaaatcatgcgtaacgcctcgatggcagtactgcgtgaaattggtgtagagaccggt
ggttcaaacgtacagtttgcagtaaaccctaaaaatggccggctaattgtcattgagatg
aacccgcgagtctcccgttcatccgctctggcttccaaagccactggcttccctattgca
aaaatcgctgcaaaactggcggttggttacacccttgacgagctgatgaatgatatcacc
ggtggactgactcctgcttctttcgaaccatcgattgactatgtcgtcactaagatccct
cgtttcaacttcgaaaaatttgccggcagtaatgaccgcctgaccactcagatgaagtcc
gttggtgaagtcatggcgattggccgcactttccaggagtctctgcaaaaagcattgcgt
ggtctggaagtcggcgcaacaggttttgacccgaaagttaatctggatgatgtacaatca
ctgaccaaaatccgtagcgaactgaaagatgctggcgctgagcgtatctggttcgttgcc
gatgccttccgcgcgggtatgtccgttgatggtatcttcaacctgaccaacattgatcgc
tggttcctggtacagattgaagagctggttcgtctggaagatatggttgcagagcaaggt
atcaacggcctgacttccggcttccttcgtcagttgaaacgtaaaggttttgctgatgca
cgtctggcaaaactggctggtgtatccgaaaaagagatccgtaaactgcgccatgattat
ggtctgtatccagtttacaagcgtgtagatacctgtgcggctgagttttcaaccgatact
gcctacatgtactccacttatgaagatgagtgcgaagctaacccaaataatgataagcca
aaaatcatggtattgggtggtggcccgaaccgtatcgggcaaggcatcgaattcgattac
tgctgcgtacacgctgctctggcgctgcgcgaagacggttacgaaaccatcatggttaac
tgtaaccctgaaacggtttcaacagattatgacacctccgaccgcctttattttgagccg
gtaacactggaagacgtactggaaattgtccgcgttgaacagccaaaaggcgtgatcgta
cagtacggcggccagactccgctgaaactggcacgtgaactggaagcagccggtgtgcca
attatcggtaccagcccggatgccattgaccgtgcagaagaccgtgaacgttttcagcaa
gcagtcaaccgtcttggcctgaaacaaccggcaaatgctactgtgacaaccatcgaacaa
gcgattgaaaaaggtaacaacctcggttatccgctggtagttcgcccttcctatgtactg
ggtggccgggcaatggaaatcgtatacgatgaaactgacctgcgtcgttatttccaaacc
gcagtcagtgtttctaacgatgcgccggttctgctggatcgcttcctcgatgatgctgtt
gaagttgatgtggatgctatctgtgacggcgaacgcgtcctgatcggcggcatcatggaa
catattgaacaggcgggtgttcactctggtgactctgcctgctccttgcctgcctatacc
ctgagcaaggaaattcaggatgtgatgcgtaatcaggttgagaaactcgcctttgaatta
cgtgtccgtggtttgatgaacgttcagtttgctgtgaaaaacaacgaagtctatctgatc
gaagtgaacccacgtgcagcacgtactgtaccattcgtttccaaagcaacgggcatgccg
ctggcgaaagtcgctgcacgcgtaatggctgggcagtccttacagtcacagggtgtaact
aaggaaatcatcccaccttattactccgtgaaagaagtcgtattgccattcaataaattc
ccgggagttgacccgattctggggccagaaatgcgctctaccggtgaagtcatgggtgtt
ggccgtacctttgctgaagctttctccaaggcaatgctgggcagtaactccatcatgggt
aaaaaaggccgcgcactgctgtcagtacgtgaaggcgataaagagcgtgttgttgatttg
gcagctcaattagttaagcagggctttgaactggatgcaactcatggtactgcggttgtt
ctgggtgaagcaggaatcaacccacgtctggtaaacaaagtgcatgaaggtcgcccacac
atacaggacagaatcaaaaacggtgaatatgactatatcgtcaataccaccgcaggccgt
caggcgattgaagattctaaactgcttcgtcgcagcgcactgcaatataaagtgcattat
gacacaaccctgaatggcggtttcgcaaccaccatggcgctcagtgctgacccgactgag
caggtcatttccgtacaggaaatgcacgcaaaaattaccaagtaa
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