Xenorhabdus stockiae: AB0856_001025
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Entry
AB0856_001025 CDS
T11396
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xsk Xenorhabdus stockiae
Pathway
xsk03410
Base excision repair
xsk03430
Mismatch repair
xsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB0856_001025 (recJ)
03430 Mismatch repair
AB0856_001025 (recJ)
03440 Homologous recombination
AB0856_001025 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xsk03400
]
AB0856_001025 (recJ)
DNA repair and recombination proteins [BR:
xsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AB0856_001025 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB0856_001025 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AB0856_001025 (recJ)
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Other DBs
NCBI-ProteinID:
YAP79852
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Position
1145345..1147078
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AA seq
577 aa
AA seq
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MNRKTQLRRRPAADDSLLPDSIHPLLRRLYVTRGIRQADELERGAKGLLNYQSLSGIDRA
VSLLVEALQQHWRIVIVGDFDADGATSTALSIRALRAMGYRDLDYFVPNRFEDGYGLSVQ
VVNDVVKKGADLIITVDNGISSHDGVMVAHQHGLKVIVTDHHLPGETLPTADAIVNPNLT
DCSFPSKALAGVGVAFYLMSALRAELRKIAWFEQQGIPLPNLAELLDLVALGTVADVVPL
DTNNRILVYQGLNRIRAGRCCAGIRALLEISKREAAKLSASDLGFSLGPRLNAAGRLDDM
SVGVTLLLTDDMAQARQIACELDGLNQTRREIEQGMQQEALQICDQIERTHTELPYGLAI
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSINGLHMRDALERLDTLYP
GLMLKFGGHAMAAGLSLEQDKFELFQRHFSALVAEWLDIAQLEGVVWSDGELTLGELSLE
IAEVLRDGGPWGQAFSEPVFDGKFRLLQQRIVGEKHLKVMIEPLSGGPMLDGIAFNIDTK
YWPDNSVKTVELAYKLDINEFRGNRDVQLLIQHIWPC
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagaaaaacacaactccgccgccgtccagcggcggatgatagtctccttcctgat
agtatccacccactattacgccgtctttatgtcacgcgaggcatacgtcaggctgatgag
ttagaacgcggtgctaaagggttactcaattatcagtctctcagtggtatagacagggct
gtttctctgcttgttgaagcattacaacaacattggcgcattgttattgttggtgatttt
gatgctgacggcgcgaccagtaccgcattaagcattcgggcgttacgtgcaatggggtat
cgggatctggattactttgtgcctaatcgctttgaagatggctatggcttgagtgtgcag
gttgtaaacgatgtcgtgaaaaaaggcgcagatctgatcatcaccgtggataatgggatc
tcttcccatgatggtgtcatggttgcacatcagcatgggcttaaagtgatcgtcacagat
caccatttgccgggagaaacgttgccgaccgcagatgccattgttaacccgaacctgacg
gattgctccttcccttcaaaagcgctggcaggtgttggtgttgctttttatctgatgtca
gcccttagggccgaattacgtaaaatagcgtggtttgagcaacagggtattcctttgcct
aatctggcggaacttcttgatctggttgctctgggaacagtggctgatgtggttccgctg
gataccaataatcgcattttggtgtatcagggattgaatcgaatccgtgccgggcgttgt
tgtgctggtatccgggcattgctggaaatttctaaacgggaagcagcaaaattatcagcc
agtgatttgggattttctcttgggccacggttaaatgccgcaggacggctggatgatatg
tccgttggggtcacgctgttattaactgacgatatggctcaggcccggcagatcgcctgt
gaactggatggactgaaccagacccgccgcgaaatcgaacagggaatgcagcaggaagcc
ttgcaaatttgtgaccagattgagcgcacacataccgaattgccttatggactagccatt
tatcatccagagtggcatcagggagtagtgggcattctggcatcacgtattaaagaacgc
tttcatcggccagtgattgcttttgctcctgcgggtgatggcacactgaaaggttcaggc
cgttccatcaatgggctgcacatgcgcgatgcgcttgagcgccttgatactttatatccc
ggattaatgctgaaatttggtggtcatgcaatggctgccggattatcgttggagcaggat
aaatttgagttgtttcagcgccatttctctgccctggtcgctgagtggctggatatagca
cagctggaaggtgttgtctggagcgatggagagctgacactgggagaactctcactggag
atcgcagaggttcttcgggatggtggcccttgggggcaggcattttctgagccggtattt
gacggaaagttcaggttgttgcaacagcggattgttggtgaaaagcatctgaaagtcatg
attgagccattaagcggagggccaatgctggatggtattgcgtttaacattgacaccaag
tactggcctgataatagcgtcaaaacggttgaattggcttataaactggatattaacgag
tttcgaggtaatcgtgatgttcagcttttgatccaacacatctggccctgttaa
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