Xenorhabdus stockiae: AB0856_001027
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Entry
AB0856_001027 CDS
T11396
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
xsk Xenorhabdus stockiae
Pathway
xsk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AB0856_001027 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xsk01007
]
AB0856_001027 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xsk03016
]
AB0856_001027 (lysS)
Enzymes [BR:
xsk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
AB0856_001027 (lysS)
Amino acid related enzymes [BR:
xsk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AB0856_001027 (lysS)
Transfer RNA biogenesis [BR:
xsk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
AB0856_001027 (lysS)
Prokaryotic type
Other AARSs
AB0856_001027 (lysS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
YAP79854
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All DBs
Position
1148349..1149863
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AA seq
504 aa
AA seq
DB search
MSQQQQGAEQAPDLNNELKTRREKLVTLRSNGIAFPNDFRRENISEDLHAKYDDKTQEEL
EALNVEVTVAGRMMTRRIMGKASFATLQDMGGRIQIYVSRDDLPEGIYNEQFKKWDLGDI
LGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGLADQETRYRQRYLDLISNDESR
KTFQIRSRVMAALRNFMVSKDFMEVETPMMQAIPGGASARPFTTHHNALDIDMYLRIAPE
LYLKRLVVGGFERVFEINRNFRNEGISPRHNPEFTMMELYMAYADYQDLIVLTEELFRTL
TQDVLGTTLVKYGEQEFDFGKPFVKMTMKEAICKYRPETNMADLDDMDKAVAIAESIGIE
IDKGWGLGRIQCEIFEETAESHLIQPTFITEYPAEVSPLARRNDDNPFITDRFEFFIGGR
EIGNGFSELNDAEDQAERFAEQVRQKDEGDDEAMFYDDDYVTALEHGMPPTAGLGIGIDR
MVMLFTDSHTIRDVILFPAMRPNK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacaacagcagggggctgagcaggctcctgacttaaataacgaactgaaaaca
cgccgtgagaaactggttacgctgcgtagcaacggtattgcattcccgaatgattttcgt
cgtgaaaacatttctgaagatctgcatgcaaaatacgatgataagacgcaggaagagctg
gaagcactgaatgttgaagtcactgttgctggtcgtatgatgacccgccgtatcatgggc
aaggcctcttttgcgaccttgcaggatatgggcggtcgtattcagatctacgtttctcgt
gatgatctgccggaaggcatctataacgagcagttcaaaaaatgggatttgggtgacatt
ttaggtgcacgcggtaagttgtttaaaaccaaaacgggtgagctttctatccactgtagt
gaattgcgtctgctgactaaagcactgcgcccactgccggataaattccacggcctggcg
gatcaggaaacgcgttatcgtcagcgttatctggatctgatctccaatgatgaatcgcgc
aagacattccagatccgctcccgcgttatggctgcactgcgtaatttcatggtcagtaaa
gacttcatggaagtcgaaacgccaatgatgcaggctatccctggtggggcgagtgcacgt
ccattcactacccatcacaatgcgctggatatcgacatgtatctgcgtattgcaccagag
ctttatctgaaacgtctggtggttggtggttttgaacgcgtgtttgaaatcaaccgcaac
ttccgtaacgaaggtatttctccgcgtcataacccagagttcactatgatggaactctac
atggcttatgcggattatcaggatctgatcgttctgactgaagagttgttccgtaccttg
actcaggatgtactgggaacgactttggtcaaatacggcgaacaagagttcgattttggc
aagcctttcgtcaaaatgaccatgaaagaagcaatctgtaaatatcgcccggaaaccaac
atggcggatctggatgatatggataaagcagtggctatcgctgaatctattggtattgaa
attgataaaggctggggattgggccgtattcagtgcgaaatctttgaagaaaccgcagaa
agccacttaatccagccaacattcattactgaatatccggcagaagtttctccgttggca
cgtcgtaatgatgataacccattcattactgatcgttttgaattcttcattggcggacgt
gaaattggtaacggtttctccgagctgaacgacgcagaagatcaggcagaacgttttgct
gagcaggttcgtcagaaagatgaaggtgacgacgaagcgatgttctacgatgatgactac
gtcactgcactggaacacggcatgccaccaacagcaggtctgggcatcggtatcgaccgt
atggtgatgctgttcactgacagccataccatccgtgacgtgatcctgttcccggctatg
cgtccgaataaataa
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