Xenorhabdus stockiae: AB0856_001410
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Entry
AB0856_001410 CDS
T11396
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xsk Xenorhabdus stockiae
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xsk03032
]
AB0856_001410 (gyrA)
03400 DNA repair and recombination proteins [BR:
xsk03400
]
AB0856_001410 (gyrA)
Enzymes [BR:
xsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AB0856_001410 (gyrA)
DNA replication proteins [BR:
xsk03032
]
Prokaryotic type
DNA Topoisomerases
AB0856_001410 (gyrA)
DNA repair and recombination proteins [BR:
xsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB0856_001410 (gyrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
YAP80210
LinkDB
All DBs
Position
complement(1591782..1594430)
Genome browser
AA seq
882 aa
AA seq
DB search
MSDIAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVIDGCLAYIDDENISIEGLMEYIPGPDFPTAAIINGRRGIQEAYRTGRGKV
YIRARAEVETDEKNGRETIIVNEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSLTQLQVSFGINMVALHQGQPKLLNLKEILSAFVSHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPVIELIRRAPTPAEAKANLISQAWELGNV
AAMLAQAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYRE
LLIVIAELMFILESPERLLEVIREELLAIKEQYNDKRRTELTENSADINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIERLLVANTHDTILCFSNKGKMY
WLKVYQLPEASRGARGRPIVNLLPLGQDERITAILPVREYEEGLNIFMATASGVVKKTKL
SEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAQGKVVRFLEEEEETLEDGTVR
VKGVRAMGRTATGVRGIKLAEGDKVVSLIIPRGEGQILTVTENGYGKRTAEKEYPTKSRA
TQGVISIKVSERNGNVIGAIQVEPTDQIMMITDAGTLVRTRVSEVSTVGRNTQGVTLIRT
AEDEKVVGLQRVAEPDDDEDEDEDGNIVTPSDEEGNGAEDQE
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacattgccagagaaatcaccccggtcaatatcgaagaagagctgaaaagctca
tatctggattatgcgatgtccgttattgttggacgcgcactgccagatgttcgagacgga
ctgaagcccgtacatcgccgtgtactttttgcgatgaatgtactgggaaatgattggaat
aaaccctataaaaaatctgcccgcgttgttggggatgtgatcggtaaataccatccacac
ggcgacaccgctgtttacgacacgatcgttcgtctggcacagccattctccatgcgttat
atgctggttgacggtcaggggaactttgggtcagttgacggcgactctgcggctgcgatg
cgttataccgaagtacgcatgtcaaaaatagcccatgaattgctggcagacctggaaaaa
gagaccgtcgattttgtgcctaactatgatggcactgagcaaattcccgatgtaatgcca
acccgtatccccaatctactggtgaatggttcatcagggattgcggtcggcatggcaact
aacattccgcctcataacctgtctgaggtgatcgatggctgtctggcatatattgatgat
gaaaatatcagtattgaaggcctgatggaatatatcccggggcctgatttcccgacagca
gccattattaatggtcgtcgtggtattcaggaagcctaccgtaccggtcgcggtaaagtt
tatatccgtgcccgcgcagaagttgaaactgacgagaaaaatggccgcgaaaccattatc
gtcaatgaaatcccttatcaggtaaacaaagcgcgcctgattgagaaaatcgctgaactg
gttaaagataagcggatcgaagggattagtgcgttacgtgacgaatccgataaagatggt
atgcgcatcgttatcgaagtaaaacgtgatgcggtcggtgaagttgttctgaataatctg
tactctcttacccagttgcaggtttcattcggtatcaacatggttgctctgcatcagggt
caacctaagctgcttaatctgaaagaaattctttctgcatttgtcagccaccgtcgggaa
gttgtcacccgaagaacaatttttgaactacgcaaagcccgtgatcgtgctcatatcctt
gaagcactggctattgcgctggcaaatatcgatccggttatcgaattgatccgccgtgct
cctactcctgctgaagcgaaagcaaacctcatttctcaggcatgggaattaggtaatgtt
gcagccatgctggctcaggccggtgacgatgcagcgcgccctgagtggctggaaccagaa
tttggtattcgtgacggcaagtactatctgaccgaacaacaggctcaggctattttggat
ctgcgtttgcagaaactaaccggtctggagcacgaaaagctgcttgatgaataccgcgag
ctgctgatagttatcgctgaactgatgttcattctggaaagccctgagcgtctgctggaa
gtaatccgggaagagttacttgccatcaaagagcagtataacgataaacgtcgtactgaa
ctgactgaaaactcagcagatatcaacattgaagacctgatcaatcaggaagatgttgtg
gtcacactttcccatcagggatatgtaaaataccagcctctgtctgattatgaagcccag
cgccgtggtggtaagggtaaatccgcagcacgtatcaaagaagaagatttcattgaacgt
ctgctggtagccaatactcacgatacaattctttgcttctctaacaaaggcaaaatgtac
tggctcaaagtctatcaactgccagaagcaagtcgcggtgcccgtggtcggccaatcgtc
aacctgttgccattaggtcaggacgaacgcattaccgctattctgccggtacgtgaatat
gaagaaggtctgaatatcttcatggcaactgcaagcggcgttgttaagaagactaagctc
agcgaattcagccgtccgcgtagcgccggtattatcgccgttaatctgaatgaaggcgat
gaactgatcggtgttgacctcactgatggcagtaatgaagtcatgctgttctctgcacag
ggtaaagtagttcgcttccttgaagaagaggaagaaacgctggaagatggtacggttcgc
gtgaaaggcgtccgtgcaatgggacgtacagcaaccggagtccggggtattaaactggct
gaaggagataaagtcgtttctctgattattcctcgcggagaaggacagatcctgacggtg
acagaaaacggttatggaaaacgaaccgcagagaaagaatacccaaccaaatcccgtgca
actcagggcgttatctcgatcaaggtcagtgaacgtaacggtaatgtgattggggcaatt
caggttgaaccaaccgatcaaatcatgatgattactgatgcaggaacattggtacgcacc
agagtgtctgaagtcagcaccgtcggtcgtaatactcaaggggttaccttgatccgcacg
gcagaagatgaaaaagtggttggcttgcagcgtgtagctgaacctgatgatgatgaagac
gaagacgaagacggtaatatagtcacgccttctgatgaagaaggtaatggagcagaagat
caggaataa
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