Xenorhabdus stockiae: AB0856_003325
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Entry
AB0856_003325 CDS
T11396
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xsk Xenorhabdus stockiae
Pathway
xsk03030
DNA replication
xsk03430
Mismatch repair
xsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB0856_003325 (dnaX)
03430 Mismatch repair
AB0856_003325 (dnaX)
03440 Homologous recombination
AB0856_003325 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xsk03032
]
AB0856_003325 (dnaX)
03400 DNA repair and recombination proteins [BR:
xsk03400
]
AB0856_003325 (dnaX)
Enzymes [BR:
xsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB0856_003325 (dnaX)
DNA replication proteins [BR:
xsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB0856_003325 (dnaX)
DNA repair and recombination proteins [BR:
xsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB0856_003325 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_14
PIF1
ResIII
AAA_2
AAA_30
TsaE
nSTAND3
AAA_assoc_2
AAA_7
AAA_16
AAA_19
SKI
Motif
Other DBs
NCBI-ProteinID:
YAP82050
LinkDB
All DBs
Position
complement(3895180..3897186)
Genome browser
AA seq
668 aa
AA seq
DB search
MSYQVLARKWRPQIFSDVIGQQHVLTALANGLEHQRLHHAYLFSGTRGVGKTTIARLLAK
GLNCETGITKTPCGQCVNCLEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
SQISGQLEHVLNAEQIESEARARQLLARAADGSMRDALSLADQAIALGGGKLTADIVSQM
LGTLDDEQPLEMVEALVRADGQKLLTLVEQVAARGMDWENLLVEMLSLLHRVAMIQLLPQ
QPEIEPSSTEGRLRLLARSMPPSDLQLYYQALLTGRKDLPYAPERRMGVEMALLRALAFH
PKTIIEEIPASNNAEIPVAPGTEFMPPQPVSDNFGSVSPTSAAGMTDKQSSAQKQRMAPT
EGLEPVADSPTAKLLQAKNLLSRQEGTSSKGSAPPKKAEPAASVKAKPASSALERLVAVA
EQRPQSFVPKAREVKPVKQEAYRWRAKNIEEKRVVTTPKAIKSALEYEKTPELVKKLAIE
SRQRDQWAAEIDNLNIPKLVQQVALNAFKEQINENQFCLHLRSKQRHLNSASAQRSLSEA
LTELHGKPIELSIIEDDNPAVKTPLEWRQAIYEEKLAQARQSIISDKTIQTLQQLFDAEV
DEESIRPV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtacttgcccgtaagtggcgcccacaaatattttctgatgtgattggt
cagcaacatgtgttgactgcattggctaatggtcttgaacaccagcgcctccatcatgct
tatcttttttccggcactcgtggtgttgggaagactactattgcccgcctgttggcaaag
ggcctgaattgtgaaacaggtatcacaaaaacgccttgtgggcagtgtgttaactgtctc
gaaattgagcaggggcggtttgtcgatctgattgaaatcgatgccgcatcacgaacaaaa
gtagaagatacccgtgaactgctggataacgtgcagtatgccccagccagagggcgtttc
aaagtttacctcattgacgaagttcacatgctgtcccgccatagttttaatgctttactc
aagacattagaagagccgccagaacatgtgaaatttttgctggcgacgacagacccacag
aaattacccgtaaccattctttcgcgctgtctacaattccatctgaaagcacttgatgtc
agccagatttcaggccagctggaacatgtgcttaatgcggaacaaatagagagtgaagcc
cgagctcgtcagctattggcccgcgcagcggacggcagtatgcgtgatgctttaagtctg
gctgatcaggcgattgcccttggtggcggaaaactgacagcagatattgtcagccagatg
ttgggaacgctcgatgatgaacagcctttagaaatggttgaagctctggtccgtgcggat
ggacagaaacttctgactttagtggaacaggtcgcagcccgtggtatggactgggaaaac
ctactggtcgaaatgttatcgttgctgcatcgtgttgcgatgattcagttgctgcctcag
caaccagagattgagccttcttcaacagaagggcgcttgcggttgttggcgagatcaatg
ccacccagcgatttacaactttattatcaggcgttgttaaccggtcgtaaagatctccct
tatgctccagagcgtaggatgggggttgaaatggcattattacgtgctctggcatttcat
ccaaaaacgataattgaagaaatacccgcatccaataatgcagagataccggtcgcaccg
ggtacagaattcatgcctcctcagccagtgtctgataattttggttctgtcagcccgaca
tctgcggctggcatgacagataaacaatcctctgcgcagaaacagagaatggccccaacg
gaggggttagaaccagttgctgacagcccgactgcaaaattactacaggcaaaaaatctg
ctttcgcggcaggaaggcacttcctcaaaaggaagtgctcctccaaaaaaggctgagccg
gcagcgtctgttaaggcgaagccggcgagttcggcactggagcgattggttgcggtggcc
gaacaacggcctcagtcttttgttcccaaggctcgtgaagttaaaccggtaaagcaagaa
gcttatcggtggcgtgctaaaaatattgaagaaaagcgggttgttacaacaccaaaagct
atcaaatcagcacttgaatatgaaaaaacacctgaattggtgaaaaagctggctattgaa
tccagacagcgggatcaatgggcggctgaaattgataatctgaatattcctaaactggtt
cagcaggtagctttgaatgcatttaaagagcagattaatgaaaatcagttctgtcttcat
ctgcgttcaaagcaacgtcacctaaattcggcatcggcacagagatctttatcggaagcg
ttgactgaattgcatggaaaacctattgaactcagtattattgaagatgataatccagca
gtaaaaacaccgctggagtggcgacaagccatctatgaagaaaaattggcacaagcgcgc
caatccattatttcggataaaacgatccaaacacttcaacaattgtttgatgctgaagtg
gatgaagaaagtatccggcctgtttaa
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