Xenorhabdus stockiae: AB0856_003369
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Entry
AB0856_003369 CDS
T11396
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
xsk Xenorhabdus stockiae
Pathway
xsk00860
Porphyrin metabolism
xsk01100
Metabolic pathways
xsk01110
Biosynthesis of secondary metabolites
xsk01120
Microbial metabolism in diverse environments
xsk01240
Biosynthesis of cofactors
Module
xsk_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
xsk_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
AB0856_003369 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xsk04147
]
AB0856_003369 (hemB)
Enzymes [BR:
xsk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
AB0856_003369 (hemB)
Exosome [BR:
xsk04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AB0856_003369 (hemB)
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Other DBs
NCBI-ProteinID:
YAP82093
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Position
complement(3947293..3948309)
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AA seq
338 aa
AA seq
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MSYAFPGTFPGRRMRRVRRHDFSRRLVAENQLTVNDLIYPVFVMEGTNQRQEVPSMPGVY
RLTTDLLLKEAEEIARLGIPVLSLFPVIESDKKSLDAKEAYNPDGLIQRSIRALKDAVPE
LGLLTDVALDPFTTHGQDGVIDQDGYVINDITKEILVKQALSHAEAGAEIVAPSDMMDGR
IGAIREQLENDGHVNTQIMAYSAKYASCYYGPFRDAIGSSANLKGGNKMTYQMDPANSDE
ALQEIAQDLQEGADSVMVKPGMPYLDVIRRVKDTFGVPTFAYQVSGEYAMHMAAIQNGWL
KEQPAIMESLLCFKRAGADGILTYFAKRAAQWLHEQKS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcatttccaggtacgtttcctggccgtcgtatgcgccgtgtacgccgccat
gatttttcccgccgtttagtcgctgaaaatcaactcactgttaatgacttaatctatccg
gtgttcgtgatggaaggtactaatcagcgtcaggaagtgccttccatgccgggagtatat
cgtttgacaaccgatcttctgctgaaagaagccgaagagattgcccgattgggtatccct
gttttgtctctgtttccggtcattgaatctgataaaaaatcactggacgcgaaagaagct
tataatccggatggtttgattcaacgctctatccgtgcactgaaagatgcggttcctgaa
ttggggttactgaccgatgtagcgctggatccttttacaacgcatgggcaggatggggtt
attgatcaggatggttacgttatcaacgatattaccaaagagattttggtcaaacaggcg
ttatctcatgcagaagcaggggctgaaatcgttgcaccaagcgatatgatggatgggcgt
attggggcgattcgcgaacaacttgagaatgacgggcatgtaaacacgcagattatggct
tattctgccaaatatgcttcctgctattacggaccattccgtgatgcgataggctccagc
gctaatctgaaaggtggcaacaagatgacctatcagatggatccggcaaacagtgatgaa
gcattgcaggaaattgcacaggatctacaggaaggggccgatagcgtgatggtaaaacct
gggatgccttatctggatgtgatccgcagagtaaaagatactttcggtgtaccgacattt
gcttatcaggtatccggtgaatatgcgatgcatatggctgctattcagaacggttggctg
aaagaacaacctgcaattatggaatcgttactctgttttaaacgggcaggggctgatggg
atcctgacttactttgccaaacgtgcggcgcaatggttgcatgagcaaaagagctaa
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