Xenorhabdus stockiae: AB0856_003644
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Entry
AB0856_003644 CDS
T11396
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xsk Xenorhabdus stockiae
Pathway
xsk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB0856_003644 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xsk03019
]
AB0856_003644 (pnp)
03016 Transfer RNA biogenesis [BR:
xsk03016
]
AB0856_003644 (pnp)
Enzymes [BR:
xsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AB0856_003644 (pnp)
Messenger RNA biogenesis [BR:
xsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB0856_003644 (pnp)
Transfer RNA biogenesis [BR:
xsk03016
]
Prokaryotic type
tRNA degradation factors
AB0856_003644 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
YAP82350
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Position
complement(4259756..4261897)
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AA seq
713 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTIETGMMARQATAAVMVNMDDTAVFVTVVGQKKVKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPGEGETLVARLIDRPLRPLFPEGFLNEVQIIATVVSV
NPQVNPDIVAMIGSSAVLALSGIPFNGPIGAARVGYINDQYVLNPTSDELKNSRLDLVVA
GTNNAVLMVESEAELLTEEQMLGAVVFGHEQQQIVIDNINALVAEAGKEKWNWSPEPVNQ
SLHERVAELAESRLGDAYRITEKQDRYAQVDAIKEEVAAIILAEAAEKDLELEESEILDV
LAVLEKNVVRSRVLRGEPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVAATL
GTERDAQVIDELMGERTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMP
SINEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFV
VLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITREIMQIALNQAKGARLHILSV
MEQAIQSPRNDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVK
IAATDGDKARHAISRIEEITAEVEVGRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIAD
KRVEKVTDYLQLGQEVPVKVLEIDRQGRIRLSMKEAVANTAAEAPQLPESSVE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgattgttcgtaaattccagtatggtcagcacactgtgaccatcgaaacc
ggcatgatggctcgtcaagcgacagccgctgttatggttaatatggatgacaccgcggta
tttgttaccgttgttggtcagaaaaaagtgaaaccaggtcaggatttctttccactgact
gttaactatcaagaacgtacttatgcggctggccgtattccaggaagttttttccgtcgt
gaaggccgtccgggtgaaggcgagactctcgttgcccgtttgatcgaccgtccactgcgt
cctctgttcccagaaggcttcctgaacgaagttcaaatcatcgcaaccgttgtttccgta
aacccacaggttaacccggatatcgttgctatgatcggttcttccgcagtattggcactg
tctggtatcccgttcaatggcccgattggtgcagcgcgtgttggttatatcaatgaccag
tatgtactgaacccaaccagcgatgaactgaaaaacagccgtctggatttggttgttgca
ggtacaaataacgctgtactgatggttgaatctgaagcagaactgctgacagaagaacaa
atgttgggcgcggttgtattcggtcatgagcaacaacagattgtgattgataacatcaac
gcactggttgctgaagcaggtaaagagaagtggaactggtcacctgagccagttaaccag
tctctgcatgagcgtgtggctgagctggcagaaagccgtctgggtgatgcttaccgtatc
actgagaaacaagatcgttatgctcaggttgatgctatcaaagaagaagtagctgcaatc
attctggcagaagcagcagaaaaagatctggagctggaagagtcagaaattcttgacgta
ctggctgttctggagaaaaacgttgttcgtagccgtgttctgcgtggtgagccacgtatt
gatggccgtgaaaaagatatggttcgtgcactggatgttcgcactggcgtcttgccacgt
actcatggctcatctctgttcacccgtggtgaaactcaggcgctggttgcagcaactctg
ggtactgagcgtgatgcacaggttatcgatgaactgatgggtgagcgtacagaccgcttc
ctgttccactacaacttccctccatactctgtaggtgaaactggtatggttggttcacca
aaacgtcgtgaaattggtcacggtcgtttggcgaagcgtggtgttctggcagtaatgcct
agcattaatgaattcccgtataccgtgcgtgtcgtttctgaaattactgaatccaatggt
tcttcttctatggcttccgtctgtggtgcttctctggcactgatggatgcaggcgtgccg
attaaagccgcagttgctggtatcgctatgggtctggtgaaagaaggtgaaaactttgtg
gttctgtctgatattctgggtgatgaagatcatctgggcgacatggactttaaagttgcg
ggtagccgcgatggtatcagcgcattgcagatggatatcaaaattgaaggtatcacccgt
gaaatcatgcagattgctctgaatcaggctaaaggtgcccgtttacacatcctgagcgta
atggagcaggctatccaaagcccacgtaatgatatctctgaatttgcaccacgcattcac
accattaagatcaatccagacaagatcaaagatgtgattggtaaaggcggttcagttatc
cgtgcactgacagaagaaaccggtacaaccatcgagatcgaagatgatggtactgtgaag
atcgcagcaactgacggcgataaagctcgtcatgctatcagccgtatcgaagaaatcact
gctgaggttgaagttggccgcatttatgcaggtaaagtgactcgtattgttgacttcggt
gcattcgttgctatcggtggcggtaaagaaggtctggtacatatttctcagatagctgac
aagcgtgtagagaaagtgactgactatttgcagctgggtcaggaagttccggtcaaggta
ctggaaatcgatcgtcagggtcgtatccgcctgagcatgaaagaagctgtagctaatact
gctgctgaagcaccacaattaccggaatcatcagtagaataa
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