Xenorhabdus stockiae: AB0856_003765
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Entry
AB0856_003765 CDS
T11396
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
xsk Xenorhabdus stockiae
Pathway
xsk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB0856_003765 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xsk03019
]
AB0856_003765 (rhlB)
Enzymes [BR:
xsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB0856_003765 (rhlB)
Messenger RNA biogenesis [BR:
xsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB0856_003765 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
YAP82461
LinkDB
All DBs
Position
4388482..4389765
Genome browser
AA seq
427 aa
AA seq
DB search
MSKTHLTEKKFSDFALHPKVIEALDKKGFSNCTPIQALTLPFTVEGQDVAGQAQTGTGKT
LAFLTSTFHYLLSHPAAADHKTNQPRALIMAPTRELAVQIYSDAEELAEATGLKMGLAYG
GDGYDKQLKVLEAGVDIIIGTTGRLIDYAKQGYINLSAIQVVVLDEADRMYDLGFIKDIR
WLFRRIPSATERMTLLFSATLSYRVRELAFEQMNNPEYVEVEPLQKTGHRIKEELFYPSN
EEKMSLLQTLLEEEWPDRCIIFANTKHRCEDIWAHLAADGHRVGLLTGDVAQKKRLRILE
EFSLGNVDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIEEYIQHQIPVSKYNSDALLKDLPVPKRRNRSRSGGHPRRTNMPRRGNTV
RNRKRNP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttgacagaaaagaagttttccgacttcgcattgcaccccaaggtc
attgaagcccttgataaaaagggcttttcaaactgtacgccaatacaggcgctaacattg
ccttttactgtcgaaggccaggatgttgcggggcaagcacaaacaggaacgggtaagacg
ctggcatttctgacgtctacttttcattatttactcagccaccccgctgcggcggatcat
aaaaccaatcagccacgcgcgctgattatggctccgacccgcgaactggctgtccagatt
tattctgatgcagaagaactggctgaagccaccgggctaaaaatggggcttgcttatggc
ggagatggctatgataagcagctaaaagtactggaagccggtgttgatatcatcattggt
actacaggccgcctgattgattatgctaaacagggatatattaatctcagcgctattcag
gttgttgtactggatgaagcggatcggatgtatgaccttggttttatcaaggatatccgc
tggctattccgtcgtattccttctgcgactgagcgtatgacgctgctgttttccgctaca
ctctcttatcgggtacgtgagttagcttttgagcagatgaacaatcctgagtatgtggaa
gtcgaaccattacagaaaacagggcaccgtattaaggaagaactgttttatccttccaat
gaagagaaaatgagtctgttacagaccctgttggaagaagagtggcccgaccgctgtatt
atttttgctaataccaaacatcgctgtgaagatatctgggcgcatctggctgccgatggt
catcgtgtcggcctgctgaccggtgatgtcgcacagaaaaaacgtctgcgtatactggaa
gagttcagtctgggaaatgtggatattctggttgctactgatgttgctgcacgcgggctg
catattccatcagtaacacacgtatttaactatgatttaccggatgactgtgaagactac
gtccatcgcattggccgaaccggccgagcaggcgaaagtggtcattcaatcagtctggcc
tgtgaagagtatgcgctgaatctgccagctattgaagaatatattcagcaccagatccct
gtaagcaaatataacagtgatgcattgctgaaagatttaccagtgcccaaacgccgtaac
cgttcgcgttcagggggacatccacgccgcactaatatgccacgccgtggaaacactgtt
cgtaatcgtaaacgcaatccgtaa
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