Xenorhabdus stockiae: AB0856_003794
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Entry
AB0856_003794 CDS
T11396
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xsk Xenorhabdus stockiae
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xsk03009
]
AB0856_003794 (rsmB)
Enzymes [BR:
xsk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
AB0856_003794 (rsmB)
Ribosome biogenesis [BR:
xsk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AB0856_003794 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_37
Methyltransf_15
Cons_hypoth95
MTS
Methyltransf_5
TRM5-TYW2_MTfase
Methyltransf_12
Methyltransf_4
Methyltransf_33
Fibrillarin
Motif
Other DBs
NCBI-ProteinID:
YAP82484
LinkDB
All DBs
Position
4419093..4420379
Genome browser
AA seq
428 aa
AA seq
DB search
MKNTYNLRSIAAKAISQVLEQGQSLSTVIPELQQKVSDKDKALLQELCFGVMRVLPQLEW
LITQLMAKPLKGKHRIFHYLIMVGMYQLTYTRIPAHAAIAETVNGTISLKRPQLKGLING
VLRQFQRQQEELVEKSNDGGHYLHPKWLLTRIQKAYPHNWQYIVSANNQKPPMWLRVNQI
HHSTNQYFSLLQKANIDAELDTDHPNAIRLLNPCPVNILPGFDKGWVTIQDRSAQGCAEL
LMPCDGEEILDLCAAPGGKTTHILEMAPNAKVLAVDIDEQRIKRVEENLQRLNLNAVIKI
GDGRFPHKWANGEQFDRILLDAPCSATGVIRRHPDIKWLRRNEDIDQLVTLQAEILDAIW
PYLKKSGTLVYATCSILPDENSEQIKAFLKRNPDAKLSETGTQEIPGIQITPEITGGDGF
FYARLTKQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacatataacctgcgaagcatcgctgcaaaagcgattagccaagtgctggag
caaggacagtcacttagcactgttatacccgaactccaacaaaaagtatccgataaagat
aaagctctcctacaggaactctgctttggtgtaatgagagttttacctcagctggaatgg
cttataacccaattaatggcaaagccattgaaaggtaagcatcgcattttccactatttg
atcatggttggaatgtatcaacttacttatacacgtatacctgcacatgcagcgatcgca
gaaacagttaatgggacaatcagtttaaaacgtccacaattaaaaggactcattaatggc
gttcttcgacaatttcagcgccagcaagaagagttagtcgaaaaatctaatgatggcggt
cactatttacatcccaaatggctattaactcgtattcaaaaagcttaccctcacaattgg
caatatattgtcagtgcaaataatcaaaaaccaccaatgtggttacgtgtcaatcagata
catcattctacaaatcaatatttttctttgctgcaaaaagccaatatagacgcagaatta
gatacagatcatcccaacgcaattcgtctattgaatccttgtcctgtcaatatactgccc
gggtttgataaaggctgggttacgattcaggatcgttctgcacaaggctgtgctgaatta
ttaatgccatgtgatggagaagaaatacttgatctttgtgctgcaccaggcggcaaaaca
actcatatacttgagatggcaccaaacgccaaagtacttgccgttgatattgatgagcaa
agaattaagcgtgtggaagaaaacttacagcgccttaatttaaatgctgtcattaaaata
ggtgatgggcgtttcccacacaaatgggctaacggagaacaatttgatcgtattcttctt
gatgcaccatgctcagcaacaggtgtgatacgtcgccatccagatataaaatggttacga
agaaatgaagacatcgatcagttagtaacgcttcaagcagaaatacttgatgctatttgg
ccatacttaaagaaaagtggaactctggtttatgccacatgctcaattttacctgatgaa
aatagcgagcaaattaaagcatttttaaaacgcaatccggatgccaaactctctgaaaca
ggtacacaagagatccctggaatacaaattactcccgagataacaggcggtgatggcttc
ttttatgctcgattgactaagcaataa
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