Xanthomonas sontii: RAB70_00285
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Entry
RAB70_00285 CDS
T10538
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
xso Xanthomonas sontii
Pathway
xso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAB70_00285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xso03019
]
RAB70_00285
Enzymes [BR:
xso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RAB70_00285
Messenger RNA biogenesis [BR:
xso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RAB70_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
XCI84756
LinkDB
All DBs
Position
71668..73041
Genome browser
AA seq
457 aa
AA seq
DB search
MSFESLGLAPFLLRALAEQGYETPTPIQAQAIPVALEGHDLMAGAQTGTGKTAAFGLPLL
QHLGTSPQSVGPGPRKPRALILTPTRELATQVHDSLRGYSKYLRIPSTTIYGGVGMGNQL
DALRRGVDLLIACPGRLLDHLERRSVDLSGIEILVLDEADRMLDMGFLPSIKRILAKLPK
QNRQTLLFSATFEEGIKQLAREFMHDPQEIQATPSNTVADTITHRVHPVDGARKRELLLH
LLAADSRKQTLVFARTKHGADKLTMFLDKSGLKTAAIHGNKSQGQRLRALSDFKAGRITV
LVATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGSTGEAISLVAQDEAKLLR
AIARMLKREMDIRDVPGFEPVTPIRWGNNNPPDERPGGQRPPRRGSHARRGHGDAPAHAH
AHAGSKKPGGSHADGARRQGQGRRHGNGGGNRPAAPR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgaatccctgggccttgcgcccttcctgctgcgcgcgttggccgagcagggc
tacgaaacccccaccccgatccaggcgcaggccattcccgtcgccctggaaggccatgac
ctgatggccggcgcgcagaccggcaccggcaagaccgccgcgttcggcctgccgctgctg
cagcacctgggcacttcgccgcagtcggtgggccccggcccgcgcaagccgcgcgcgctg
atcctgaccccgacccgcgaactggccacccaggtccacgacagcctgcgcggctacagc
aagtacctgcgcatccccagcaccaccatctacggcggcgtgggcatgggcaaccagctc
gacgcgctgcgccgcggcgtggacctgctgatcgcctgcccgggccgcctgctcgaccac
ctcgagcgccgcagcgtggacctgtcgggcatcgagattctggtgctggacgaagccgac
cgcatgctcgacatgggcttcctgccgtcgatcaagcgcatcctcgccaagctgcccaag
cagaaccggcagaccctgctgttctcggccaccttcgaggaaggcatcaagcagctggcc
cgcgagttcatgcacgacccgcaggaaatccaggccaccccgagcaacaccgtggccgac
accatcacccaccgcgtgcatccggtggacggtgcgcgcaagcgcgaactgctgctgcac
ctgctggccgccgactcgcgcaagcagaccctggtgttcgcccgcaccaagcacggcgcc
gacaagctgaccatgttcctggacaagtccgggttgaagaccgcggcgatccatggcaac
aagagccagggccagcgcctgcgcgcattgagcgacttcaaggccggccgcatcaccgtg
ctggtggcgaccgacatcgccgcgcgcggcatcgacatcgaccagctgcccaaggtcatc
aactacgacctgccgatggtcgccgaggactacgtgcaccgcatcggccgcaccggccgc
aacggttcgaccggcgaggcgatctcgctggtggcgcaggacgaggccaagctgctgcgc
gcgatcgcacgcatgctcaagcgcgagatggacatccgcgacgtgccgggcttcgagccg
gtcacgccgatccgctggggcaacaacaacccgccggacgagcgtccgggcggccagcgt
ccgccgcgtcgcggcagccacgcccgtcgcggccatggcgatgcgccggcgcacgcgcat
gcgcacgccggcagcaagaagcccggcggcagccacgccgacggcgcccgccgccagggc
cagggccgccgccacggcaacggcggcggcaaccgccccgccgcgccgcgctga
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