Xanthomonas sontii: RAB70_00855
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Entry
RAB70_00855 CDS
T10538
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xso Xanthomonas sontii
Pathway
xso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAB70_00855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xso03400
]
RAB70_00855
Enzymes [BR:
xso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RAB70_00855
DNA repair and recombination proteins [BR:
xso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RAB70_00855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
XCI84866
LinkDB
All DBs
Position
complement(188305..189747)
Genome browser
AA seq
480 aa
AA seq
DB search
MFQAEVVPPWSLEAWRAVARAAWCAQVAPETLAWDGDAQGGLLVGTDVATLPAQVPPPRV
SAEFLALAGAVLCHRDPQRHALLYRLLWRIAGGERALLQRVTDADVHRAQQWAQAVRRDS
HKMKAFVRFREVPGEQEAYIAWFEPEHHIVDRVAPFFARRFAGMRWAILTPYRSVRWDGG
TLQFGAGAQRADAPADDAQDTLWRTYYANIFNPARLNPTMMRQEMPQKYWKHLPEAQLLP
TLIRDAGQRVREMAERAPEPVRRRIPAPAPAPVMAADDSLEALRAAARDCRRCPLWQPAT
QTVFGEGPQDAAVMVVGEQPGDEEDLSGRPFVGPAGRLFDRALQELGVERAGMYVTNAVK
HFRFEQRGKARLHRNPERAHVEACRIWLAGELARVRPRIVLCLGATAARAVLGSGFKLMA
QRGQWQALDDGTRALATVHPSWVLRQRGGEAGEAAYQGFVDDLRVLAAQVPTPHAGGAGD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggctgaggtggtgccgccgtggagcctggaggcgtggcgggcggtggcgcgg
gcggcgtggtgtgcgcaggtggcgccggagacgctggcgtgggacggcgatgcgcagggc
ggcttgctggtcgggaccgacgtcgccacgctgccggcgcaggtgccgccgccgcgggtg
tcggccgagttcctggcgctggccggtgcggtgctgtgccatcgcgatccgcagcggcac
gcgctgctgtaccgcctcctgtggcgcatcgccggcggcgagcgcgcgctgctgcagcgg
gtcaccgatgccgacgtgcaccgcgcccagcaatgggcgcaggcggtgcgccgcgacagc
cacaagatgaaggcgttcgtgcgcttccgcgaggtgccgggcgagcaggaggcctacatc
gcctggttcgagccggaacatcacatcgtcgatcgggtggcgccgttcttcgcgcggcgc
ttcgccggcatgcgctgggcgatcctcaccccgtaccgcagcgtgcgctgggatggcggg
acgctgcagttcggcgccggcgcgcagcgtgccgatgcgcctgccgacgatgcgcaggac
acgctgtggcgcacctactacgccaacatcttcaatccggcgcggctcaacccgacgatg
atgcgccaggagatgccgcagaaatactggaagcacctgccggaagcgcaactgctgccc
acgctgatccgcgacgccgggcagcgcgtgcgcgagatggccgagcgcgcgcccgaaccg
gtacggcggcgcattcccgcgccggcaccggcgccggtgatggccgccgacgacagcctc
gaggcgctgcgcgcggcggcgcgcgactgccgccgctgtccgctgtggcagccggccacc
cagaccgtgttcggcgaaggtccgcaggacgccgcggtgatggtggtcggcgagcagccc
ggcgacgaggaggacctgagcgggcgccccttcgtcggcccggccgggcgcctgttcgat
cgcgcgctgcaggagctaggggtcgaacgcgcaggcatgtacgtgaccaacgcggtcaag
cactttcgcttcgagcagcgcggcaaggcgcggctgcaccgcaatcccgagcgtgcgcat
gtcgaggcctgccggatatggctggccggcgaactggcgcgggtgcgcccgcgcatcgtg
ctgtgcctgggcgcgaccgcggcgcgcgcggtgctggggagcggcttcaagctgatggcc
cagcgcgggcaatggcaggcgctggacgacggcacccgcgcgctggccaccgtgcatccg
tcgtgggtgctgcgccagcgcggcggcgaggcgggcgaggccgcctatcaaggcttcgtg
gatgacttgcgtgtgctggcagcgcaggtgccgacgccgcacgcaggcggtgccggcgac
tga
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