Xanthomonas sontii: RAB70_02475
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Entry
RAB70_02475 CDS
T10538
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xso Xanthomonas sontii
Pathway
xso03030
DNA replication
xso03410
Base excision repair
xso03420
Nucleotide excision repair
xso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAB70_02475 (polA)
03410 Base excision repair
RAB70_02475 (polA)
03420 Nucleotide excision repair
RAB70_02475 (polA)
03440 Homologous recombination
RAB70_02475 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xso03032
]
RAB70_02475 (polA)
03400 DNA repair and recombination proteins [BR:
xso03400
]
RAB70_02475 (polA)
Enzymes [BR:
xso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAB70_02475 (polA)
DNA replication proteins [BR:
xso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RAB70_02475 (polA)
DNA repair and recombination proteins [BR:
xso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RAB70_02475 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAB70_02475 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
XCI85166
LinkDB
All DBs
Position
complement(554749..557520)
Genome browser
AA seq
923 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDDLYPLYKANRPPMPDELRAQVEPMCQIVHALGITILREDGVEADDVIGTLALQGA
GDGLDVTISTGDKDFAQLVRPGVQLVNTMSGSRMDSDAAVMEKFGVWPHQIVDLLALMGD
AIDNVPGVEKCGPKTAAKWLAEYGSLDGVIAHADSIKGKIGDNLRAALQRLPLNRELVTI
KTDVALPGGPRTLGLREQEPEQLRGLYQRYGFTQALRDLDGGVAAPEAASEATPSLRGTA
AGYARAAVPAADTALDPALAAKGDYTAVTTPEAFEALLVRLRAADGFAFDTETDALDAMR
ANLVGLSFATEPGRADYLPLGHDYPGAPVQLDRALALEMLKPLLEDPAKAKVGQHGKYDL
HVLRRHGVEVRGYADDTMLESFVLNSTASRHDMDSLARRYLGYDTVKYEDVAGKGAKQIA
FSQVAIDDATGYAAEDADITLRLHRTLSAQLDAEPALARVYREIEMPLVPVLARVEANGV
CVDIAELRKQSQDLSQRMLAAQQKATALAGRSFNMDSPKQLQAVLFDELKLPAVLKTPKG
QPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPDTGRVHTSYHQAGAA
TGRLSSSDPNLQNIPIRTDDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLLR
AFGSGVDVHRATAAEVFGRKLEEVTGNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQ
DYVALYFSRYPGVRDFMERMREQARTQGYVETLFGRRLYLNDINARQQGLRSGAERAAIN
APMQGTAADIIKRAMVGVDAWLQDHRDRALMILQVHDELVFEADADFVDTLLPEVTGRMS
AAAELKVPLVVDSGVGDNWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagccgattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgccgccggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ttgcgcgccaccctcaaggagcgccccgagtacgtggccttcgtggtcgatgcgccgggc
aagaccttccgcgacgacctgtatccgctgtacaaggccaaccggccgccgatgcccgac
gagctgcgcgcgcaggtcgagccgatgtgccagatcgtacatgcgctgggcatcaccatc
ctgcgcgaggacggggtcgaggccgacgacgtgatcggcaccctggccctgcagggcgcc
ggcgacggcctggacgtcaccatctccaccggcgacaaggatttcgcccagctggtgcgc
cccggcgtgcaactggtcaacaccatgagcggcagccgcatggattcggatgcggcggtg
atggagaagttcggggtctggccgcaccagatcgtcgacctgctggcgctgatgggcgac
gccatcgacaacgtgccgggcgtggagaaatgcggccccaagaccgcggccaagtggctg
gccgagtacggctcgctggacggggtgatcgcccatgccgactccatcaagggcaagatc
ggcgacaacctgcgcgcggcgctgcagcgcctgccgctgaatcgcgaactggtcaccatc
aagaccgacgtggcgctgcccggcggccctcgcaccctgggcctgcgcgaacaggagccg
gagcagctgcgcggcctgtaccagcgctacggcttcacccaggcgctgcgtgatctggac
ggcggcgtggccgcgccggaggccgccagcgaggcgacgcccagcctgcgcggcaccgcc
gccggctatgcccgggccgcggtgccggccgccgatacggcgctggacccggcactggcc
gccaagggcgactacaccgcggtgaccacacccgaggcattcgaagcactgctggtgcgc
ctgcgcgccgccgacggcttcgccttcgataccgagaccgacgcgctggacgcgatgcgc
gccaacctggtcgggctcagcttcgccaccgagccgggccgcgccgactacctgccgctg
ggccacgactatcccggcgcgccggtgcaactggatcgcgcgctggcgctggagatgctc
aagccgctgctggaggacccggccaaggccaaggtcggccagcacggcaagtacgacctg
cacgtgctgcgccgccacggcgtggaggtgcgcggctacgccgacgacaccatgctcgag
agcttcgtgctcaactccaccgccagccgccacgacatggactcgctggcccggcgctac
ctgggctatgacacggtcaagtacgaggacgtggctggcaagggcgccaagcagatcgcg
ttctcgcaggtggccatcgacgacgccaccggctacgccgccgaggacgccgacatcacc
ttgcgcctgcaccgcacgctgtcggcgcaactggacgccgagccggcgctggcgcgggtc
taccgcgagatcgagatgccgctggtgccggtgctggcgcgggtcgaggccaacggcgtg
tgcgtggacatcgccgagctgcgcaagcagagccaggacctgagccagcgcatgctggcc
gcgcagcagaaggccaccgcgctggccgggcgcagcttcaacatggactcgcccaagcaa
ctgcaggccgtgctgttcgacgagctgaagctgccggcggtgctgaagacccccaagggc
cagcccagcaccaacgaggaggcgctggaggcgatcgccgaccagcacgagctgccgcgg
gtgatcctggagtaccgcggcctggccaagctgcgcagcacctacaccgacaagctgccg
gagatggtcaaccccgacaccggtcgcgtgcacaccagctaccaccaggccggcgccgcc
accgggcggctgtcctcctccgatcccaacctgcagaacatccccatccgtaccgacgat
ggccgccgcatccgccgcgccttcgtcgccccgcctgggcgcaagctgatcgcctgcgac
tactcgcagatcgagctgcggatcatggcccacctgtccgaggacccgggcctgctgcgc
gccttcggcagcggcgtggacgtgcaccgcgccaccgccgccgaggtgttcgggcgcaag
ctcgaagaggtcaccggcaacgagcgtcgcgccgccaaggcgatcaacttcggcctgatg
tacggcatgagcgcgttcggcctggcccgcaacctgggcatcggccgcggcgaggcgcag
gactacgtggcgctgtacttcagccgctacccgggcgtgcgcgacttcatggagcgcatg
cgcgagcaggcgcgcacccagggctacgtggagaccctgttcggccgccgcctgtacctg
aacgacatcaacgcccgccagcagggcctgcgctccggtgccgagcgcgcggcgatcaac
gcgccgatgcagggcaccgccgccgacatcatcaagcgcgccatggtcggcgtggacgcc
tggctgcaggaccaccgcgaccgcgcgttgatgatcctgcaggtgcacgacgaactggtg
ttcgaagccgatgccgacttcgtcgacaccttgctgccggaagtgaccgggcggatgtcc
gccgcggcggagctgaaggtgccgctggtggtggacagcggggtgggcgacaactgggac
gaggcgcattga
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