Xanthomonas sontii: RAB70_03900
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Entry
RAB70_03900 CDS
T10538
Name
(GenBank) putative Ig domain-containing protein
Organism
xso Xanthomonas sontii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Calx-beta
Autotransporter
SprB
Big_9
DUF4251
NtrZ
Motif
Other DBs
NCBI-ProteinID:
XCI85442
LinkDB
All DBs
Position
899346..904412
Genome browser
AA seq
1688 aa
AA seq
DB search
MSTNCTGLRRGARIALRCLMLLVVLLMTTLHSGLAAAASSQYCPTLNATVAQGGSVQIDV
TTCDGTGVDDIGVGWNGVQPPHGTLVVPSPSGAQGTQIITYTHNGDSATSDTFPLEDGAG
DTITVNITITPSRSASITVSPSSANEDSGTPFVYTVTLSSTNSSATTVNLTRSGTATSGT
DYTGAVTSVVVPANATSASFSVTPVADTTVEPDETVIFQVANGTGYSIGNPSSATATIVN
DDYPSASIAVSPASVAEDGSANLVYTVTLSQASPSALSIGFSVGGTATSGTDYAAVNSPL
VIAAGQTSGTITVDPTPDTTVEPDETVVISLNAGSGYTVGSPSSATGTILNDDLPTLSIN
NVSQNEGNSGTTAFTFTVSLSQPAGSGGVSFDIATANGTATAGTDYISSSVNGLTIPAGS
SSATFTVQVIGDTLNEPNETFYVNVTNPNGATITGGQGVGTINNDDAQPSLSIGDVSVTE
GNSGTTTATFPVTLSAASGQTVTVNYATTDGSANAGSDYVAHSGTLTFLPGITTQNVAVT
INGDTTVEPDETFTVNLSGASNATIARATATGTILNDDAVVTISPTSLPAATAGTSYSQT
LSASGGTAPYGFAITTGTLPVGMLLSSAGVLSGTPSGTGSFNFTVSATDSGASPISGSRA
YTLTVAAPTVTLPATTLPNGTAGQAYSAAITQASGGIAPYTYAVTAGALPAGVTVNSATG
ALSGTPTVTGNFSFTLVATDSTSGTPGQASRSYTLAIVAPTLTVAPSTLPSGTAGTAYSQ
TLSTSGGTAPYTYALSSGALPAGLSLSSAGVLSGTPTVAGSFTFVVGVTDAGSFGGSHAY
TLSIASPTLAITPPTLPAAAINASYSQALSTSGGTAPYSYVLNAGTLPSGMSLSAGGVLS
GTPTTAGNFAFTVGVTDANAFTAAQAFTLTVASPTLTLSPPALPAGTAGSAYSQALSATG
GTAPYSYSLATGALPAGLSLSAAGVLSGTPTQAGSFVFTATVTDSTAGVPGQASRSYTLS
IAAPTLTPGQPTLPAGTAGTAYNQTLSTSGGTAPYSYSVVSGALPTGLSLTTAGVLSGTP
SAAGSFAFSIKVSDANGFSATQAYTLTIASAVPAPVAANDTGATLVDTALTLAVTGNDTG
SIDSIAIATAPSHGTATVDGVRLVYTPAPGYVGVDSVHYTAIGAGGSSAPAVVTITVNAR
PIAVSVTVPAVTGQAQTLDVTRDATGGPFVAAAVVAVLPANAGTATITRAAAKAAGVPTA
AADDGPGFMLTFVPNPAFSGNATVRFTLSNAYATSAEADIVFMIAPRPDPTQDAQVRGLI
DAQAESTRRFAKAQIDNFQRRLEATHRGARGFDNGVSFQASSQCRQRDRTLQSDRNLDAQ
ACDPANRDLRDGAMDGGADNASAAPRDATAAGDLGLWVGGAIRSGSLDRQSQRAGVDFQT
DGLSLGADYRVSSSFALGVGVGFGRDDSDVGRDGSRSKSTAYTLALYASYHPGQTLFFDT
LVGYQLLSYDLRRYVTDNGALAEGDRSGHQWIASLSAGADLQRGDWQITPYARVDAARAT
LDAYSEAAMAPYALRYEDMDVATTTGNLGLRLEWRRQMTWGRLTPQFRLEYQHDFQGRGD
ATLGYADIVGGTLYRTGQSVYDRNRLMLGVGVVFSTDQGLSTRVEYRGVTDGDSGSDQTW
MFNVEKKY
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgaattgcaccggtttgcgccgtggcgcgcgcatcgcattgcgctgtttgatg
ttgctggtcgtgttgttgatgacgacgttgcactccgggttggccgcggcagcgtcttcc
cagtattgtccgacgttgaacgccaccgtcgcccagggtggctcggtgcagatcgacgtc
accacctgcgacggcaccggtgttgacgacatcggcgtcggctggaacggggtgcagcct
ccccacggcacgttggtcgttcccagtccgagcggggcgcagggaacgcagatcatcacc
tacacgcacaatggcgacagtgccacgagcgacacatttccgctagaagacggcgctggc
gacaccattaccgtcaatatcaccatcacgccctcgcgcagcgccagcatcacggtttcc
ccgtccagcgccaacgaggacagcggcacgcccttcgtctacacggtgacgttgagctcg
accaacagttcggcgaccacggtgaacctgacccgcagcggcacggcgaccagcgggacc
gactacaccggcgcggtcaccagcgtcgtggtgccggccaacgcgacgtccgccagtttc
agcgtcaccccagtcgccgacaccacggtggagccggacgagacggtgatcttccaggtg
gccaacggtaccggttactcgatcggcaacccctccagcgccaccgccaccatcgtcaac
gacgactatccctcggcaagcatcgcggtgtcgccggccagcgtcgccgaagatggcagc
gccaacctcgtctacaccgtcaccctgagccaggcgtcgccgtcggcgctctcgatcggc
ttcagcgtgggcggcaccgcgacgtccggtaccgactacgcagcggtcaactcgccgctg
gtgattgcggccgggcagaccagcggcaccatcaccgtcgatcccacccccgacaccacg
gtggaaccggacgagaccgtggtgatcagcctcaatgcgggcagcggttacaccgtcggc
tcgccgtccagcgccaccggcaccatcctcaacgacgatctgccgaccctgtcgatcaat
aacgtgtcgcaaaacgaaggcaattccggcaccaccgcgttcaccttcaccgtctcgctc
agccagccggccggcagcggcggggtcagcttcgacatcgccaccgccaacggcaccgcg
accgcgggcaccgactacatctcctccagcgtgaacgggctgaccattccggccggcagc
agcagcgccaccttcaccgtgcaggtaatcggcgatacgctcaacgaacccaacgaaacc
ttctacgtcaacgtcaccaatccaaatggcgccacgatcaccggtgggcagggagtgggc
acgatcaacaacgacgacgcgcagccgtcactctcgatcggcgatgtcagcgtcactgaa
ggcaacagcggcaccaccacggccacattccccgtcaccctcagcgccgccagcggccag
accgtcacggtcaactacgcgaccaccgacggcagcgccaatgccggcagcgactatgtc
gcccactccggcaccctgaccttcttgcccggcatcaccacgcagaacgtggcggtgacc
atcaacggcgataccaccgtcgagccggacgaaaccttcaccgtgaatctctccggcgcc
agcaacgccaccatcgcgcgtgccaccgccaccggcacgatcctcaatgacgatgcggtg
gtgacgatctcgccgacgtcgctgccggcggccaccgccggcaccagctacagccagacc
ctgagcgccagtggcgggaccgcgccgtatggcttcgcgatcaccaccggcacgttgccg
gtggggatgctgctgagttccgccggcgtgctgtccggcacgcccagcggcaccggcagc
ttcaatttcaccgtgtccgcgaccgacagcggcgcgtcgcccatcagcggtagccgtgcc
tatacgttgacggtggctgcgccaaccgtgacgctgccggcgacgaccctgcccaacggc
accgccggccaggcctacagcgcggcgatcacccaggccagcggcggcatcgcgccgtac
acctatgcggtcacggccggcgccttgccggcaggcgtgaccgtcaacagtgcgaccggt
gcgctcagcggcacgcccaccgtgaccggcaatttcagcttcaccctggtcgcgaccgac
agcacctccggaacgccgggccaggcgtcgcgcagctatacgctggcgatcgtggcgccg
accttgaccgtcgccccgtccaccctgccgtccgggaccgcgggcacggcctacagccag
acgttgagcaccagcggtgggacggcgccctacacctacgcgctcagctccggtgccctg
cctgcgggcctgagcctgagcagcgccggtgtcctatccggcaccccgaccgtggccggc
agtttcaccttcgtcgtcggcgtcaccgatgccggcagtttcggtggctcgcacgcctac
accctgtccatcgcctcgccgaccctggccatcaccccgccgacgttgccggcggcggcg
atcaacgccagctacagccaggcgctgagcaccagcggcggcaccgcgccgtacagctat
gtgctcaatgccggcaccttgccgagcgggatgagcctgagtgcgggcggcgtgctgtcc
ggtacgccgaccacggccggcaacttcgcgttcaccgtgggcgttaccgacgccaacgcc
ttcactgcggcgcaggcgttcaccctgacggtggcgtcgccgacgctgacgctgtcgccg
ccggcgctgccggccggcaccgcgggcagcgcctacagccaggcgctcagcgccaccggc
gggaccgcgccctacagctacagcctcgccaccggcgcgttgccggccgggctgagcctg
agcgcggccggcgtgctgtccggtaccccgacccaggcgggcagtttcgtcttcaccgcc
accgtcaccgacagcaccgccggtgtccccggccaggccagccgcagctacacgctgagc
atcgccgcgccgaccctgaccccggggcagccgaccttgcctgccggcaccgcgggcacg
gcgtacaaccagaccctgagcaccagcggcggcaccgcaccgtacagctacagcgtggtc
agcggcgcgctgccgaccgggctgagcctgaccacggcgggcgtgctgtccggcacgccg
agcgcggccggcagcttcgccttcagcatcaaggtgagcgacgccaacggcttctcggcc
acgcaggcctacaccctgaccatcgcctcggcggtgccggcaccggtggcggcgaacgac
accggcgccaccctcgtggataccgcgctgaccctggcggtcaccggcaacgacaccggc
agcatcgacagcatcgccatcgccaccgcgcccagccacggcactgcgaccgtcgatggc
gtgcgcctggtgtacacgccggcgccgggctacgtgggcgtggacagcgtgcactacacc
gccatcggcgccggcggcagttcggccccggccgtggtcaccatcaccgtcaacgcccgc
cccatcgcggtgtcggtgacggtgccggcggtgaccgggcaggcgcagaccctggacgtc
acccgcgacgccaccggtggcccgttcgtggcggccgccgtggtcgcggtgctgccggcc
aacgccggtaccgcgacgatcacccgcgcggccgccaaggccgccggggtgccgaccgcg
gccgcggacgacggcccgggcttcatgctgaccttcgtgccgaatccggccttctccggc
aacgccacggtgcgcttcaccctgtccaatgcgtatgcgacctcggccgaggcggatatc
gtgttcatgatcgcgccgcgcccggatccgacccaggatgcgcaggtgcgcggcctgatc
gacgcgcaggccgagtcgacccggcgcttcgccaaggcgcagatcgacaacttccagcgc
cgcctggaggcgacccaccggggtgcgcgcggcttcgacaacggcgtgagcttccaggcc
agctcgcagtgccgccagcgcgaccgcacgctgcagagcgatcgcaacctggacgcgcaa
gcgtgcgacccggccaaccgcgacctgcgcgacggcgccatggacggcggcgccgacaac
gcgtcggcggcaccacgcgatgccactgcggcaggcgatctgggcctgtgggtgggtggt
gcgatccgctccggcagcctggacaggcagtcgcagcgtgccggcgtggatttccagacc
gatggcctgagcctgggcgccgattaccgcgtctcctcgtccttcgcattgggtgtgggc
gtgggcttcggccgcgacgacagcgatgtcggccgcgacggcagccgcagcaagtcgacc
gcgtacacgctggcgctgtatgccagctatcacccgggccagacgctgttcttcgacacc
ctggtcggctaccaactgctgtcctacgacctgcgccgctacgtcaccgacaacggcgcc
ctggccgaaggcgaccgcagcggccaccagtggatcgcgtcgctgtcggccggtgccgac
ctgcagcgcggcgattggcagatcaccccgtatgcgcgggtggatgccgcgcgcgccacg
ctggacgcctacagcgaagcggcgatggcgccgtatgcgctgcgctacgaggacatggac
gtggccaccaccaccggcaacctcggcctgcgcctggaatggcgccggcagatgacctgg
ggacggctgacgccgcagttccggctcgagtaccagcacgacttccagggccgcggcgac
gccacgctgggctatgccgacatcgtcggcggcaccctgtaccgcaccgggcagagcgtg
tacgaccgcaaccggctgatgctgggcgtgggcgtggtgttcagcaccgaccagggcctg
tccacgcgcgtggagtaccgcggcgtgaccgacggcgacagcggcagcgaccagacctgg
atgttcaacgtcgagaagaagtactga
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