Xanthomonas sontii: RAB70_03920
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Entry
RAB70_03920 CDS
T10538
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xso Xanthomonas sontii
Pathway
xso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RAB70_03920 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xso03400
]
RAB70_03920 (recD)
Enzymes [BR:
xso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RAB70_03920 (recD)
DNA repair and recombination proteins [BR:
xso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RAB70_03920 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
AAA_22
Helicase_RecD
UvrD_C
T2SSE
DEAD
AAA_16
Herpes_Helicase
nSTAND3
SLFN-g3_helicase
AAA_28
ATPase
Rad17
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
XCI85446
LinkDB
All DBs
Position
913191..915173
Genome browser
AA seq
660 aa
AA seq
DB search
MSQPNLLATLYRTGTLRTLDHAFAHSLSRLDPNTPDLVLAGAALASLAVASGHAGLDPAR
ASLLLDSRDGAAPTLPTADDWTRALAASRWVAQPAAEDPASPDCPLVLEHGLLYLRRYRE
YERRLALGLRRLAAQPLPHNDLAALAPLFAQLFPLPPGEGARRAGEGTAAAYPSDRQAQA
AALALRRALLLVTGGPGTGKTTTIARLLLLRIAQARAAGLPPPRIALAAPTGRAAERMAE
SLRAAVARALADGVDPALAEALPAGASTLHRLLGVIPDLPRFRHDADNPLPFDLIVIDEA
SMVDLPLMCKLVDAVADGAQLILLGDADQLPSVEAGDVLAAILQAAGPGDALQPDDAQAL
QPLLGHSAVAHDQGGLAGHRVHLLRGYRQAQDFALVPLADAVRSGDADGALRLLRDGQLA
GVRFHDGVDDPLAAGGDALLAHWRALGDTDDPAQALRAAARLRLLTAVRAGPQGARGLNA
RIEQLLAETASGARRLGAAAPWFHGRLLLITENSYRHGLFNGDVGICLKDAQGTLVAWFD
GAGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFEEVWLQLPARDARVLSRELVYTGITR
ARRALHIAASEPVLRAALARHAARISGLAWRLGGAERQPPPPAADILPELPSTPIQGALF
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaacccaacctcctcgccaccctctaccgcaccggcaccctgcgcacgctggac
cacgccttcgcgcacagcctgtcccgcctcgacccgaacacccccgacctggtcctggcc
ggcgccgccctggcctcgctggcagtggccagcggccacgccggcctcgacccggcacgc
gccagcctcctgctcgacagccgcgacggcgccgctcccacgctgcccaccgcagacgac
tggacccgagccctggccgcctcacgctgggtcgcacagcccgctgccgaagacccggcc
agccccgactgcccactcgtactcgaacacggcctgctctacctgcgccgctaccgcgaa
tacgaacgacgcctggccctgggcctgcgccgcctcgccgcacagccgctgccgcacaac
gacctcgccgcgctcgcacccttgttcgcccagctcttccctctccccccgggagagggt
gcccgcagggcgggtgagggtacggccgccgcctacccatccgaccgccaagcccaagcc
gccgccctcgccctgcgccgcgccctgctgctggtcaccggcggccccggcaccggcaag
accaccaccatcgcccgcctgttgctgctgcgcatcgcccaggcccgcgccgccggcctg
ccgccgccgcgcatcgccctggccgcgcccaccggccgcgccgccgaacgcatggccgaa
agcctgcgcgccgcggtggcgcgcgccctcgccgacggcgtcgacccggccctggccgaa
gcgctgccggccggcgccagcaccctgcatcgcctgctcggcgtcatccccgacctgccg
cgcttccgccacgacgccgacaacccgctgccgttcgacctgatcgtgatcgacgaagcc
tccatggtcgacctgccgctgatgtgcaagctggtcgatgccgtggccgacggcgcgcaa
ctgatcctgctcggcgacgccgaccaattgccctcggtcgaggccggcgatgtactcgcc
gcgatcctgcaggccgccggccccggcgacgcgctgcagcccgacgatgcgcaggcgctg
cagccactgctcggccacagcgcggtcgcgcacgaccagggcggcctggccgggcaccgc
gtgcacctgctgcgcggctaccgccaggcccaggacttcgccctagtgccgctggccgac
gcggtgcgtagcggcgacgccgacggcgccctgcgcctgctgcgcgacggccaactcgcc
ggcgtgcgcttccacgatggcgtcgacgacccgctcgccgccggcggcgacgccctgctc
gcgcactggcgtgccctcggcgacaccgacgatccggcgcaagccctgcgcgccgccgcg
cgcctgcgcctgctcaccgccgtgcgcgccggcccgcagggcgcgcgcggactcaacgcg
cgcatcgaacaactgcttgccgagaccgccagcggcgcacgccgcctcggcgccgccgcg
ccctggttccacgggcgcctgctgctgatcaccgagaacagctaccgccacggcctgttc
aacggcgacgtcggcatctgcctgaaggatgcccagggcaccctggtcgcctggttcgac
ggcgccggcgacggccaagtccgcggcttccacccggccgcactgcccgcgcacgaaagc
gccttcgccatgaccgtgcacaaggcccagggcagcgaattcgaggaagtctggctgcag
ttgccggcccgcgacgcccgcgtgctcagccgcgaactggtctacaccggtatcacccgc
gcccgccgcgcgctgcatatcgccgccagcgaaccggtgctgcgcgccgccctggcccgg
cacgcggcgcggatctcggggttggcgtggcggttgggtggggcggagcggcagccacca
ccgcctgcagccgatatccttcccgaactacccagcacgccgatccagggcgcgctgttt
tga
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