Xanthomonas sontii: RAB70_04140
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Entry
RAB70_04140 CDS
T10538
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xso Xanthomonas sontii
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xso03032
]
RAB70_04140
03400 DNA repair and recombination proteins [BR:
xso03400
]
RAB70_04140
Enzymes [BR:
xso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RAB70_04140
DNA replication proteins [BR:
xso03032
]
Prokaryotic type
DNA Topoisomerases
RAB70_04140
DNA repair and recombination proteins [BR:
xso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RAB70_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XCI85482
LinkDB
All DBs
Position
971643..972872
Genome browser
AA seq
409 aa
AA seq
DB search
MSNASRSTAAAEAARARQSRQAASSAGLVYVSDQEPGIVRRRAGKGFGYRLPDGSAVRDA
ATLQRIRQLAIPPAYTEVWICTRDNGHLQATGRDARRRKQYRYHADWAQVRGDGKFERIV
AFGQALPRLRRRLRRDMALPGYPRDKVLAMVVALMAETLVRVGNAEYARSNRSYGLTTLR
NRHLAFVKGGRARLQFRGKGGQEHDIEVDDVHLVKLIRGCQQLPGQALFQYRDDDGQLQP
VDSGEVNAYLREAMGESFTAKDFRTWGGTRAALQRLAALPLPDTGGERALAQAQNAVIRE
VAEALGNTPAVCRKAYIDPCVFDGWRCGRLHGLCEGVRGERQWDLITLKYLGRARTAARK
AAKAAGRSSAKAPSLRKGARAARKGAAAGAQGSGTRAKRKTATPARKRA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcgtcccgttccaccgccgcggccgaggcggcgcgtgcccgccagtcccgc
caggccgccagcagcgccggcctggtctatgtcagcgatcaggagccgggcatcgtccgc
cgccgcgccggcaagggcttcggttaccgcctgccggacggcagcgcggtgcgcgatgcg
gccaccctgcagcgcatccgccagctggcgatcccgccggcctataccgaagtgtggatc
tgtacgcgcgacaacggccacctgcaggccaccggacgcgacgcgcgccggcgcaagcag
taccgctaccacgccgactgggcgcaggtgcgcggcgacggcaagttcgagcgcatcgtc
gccttcggccaggccctgccgcggctgcgccggcgcctgcgccgcgacatggccctgccc
ggctacccgcgcgacaaggtgctggcgatggtggtggcgctgatggccgagaccctggtg
cgcgtgggcaacgccgaatacgcgcgcagcaaccgctcctacggcctgaccacgctgcgc
aatcgccacctggcgttcgtgaagggcggccgtgcgcggctgcagttccgcggcaagggc
ggccaggagcacgacatcgaggtcgacgacgtgcacctggtcaagctgatccgtggctgc
cagcaattgccggggcaggcgctgttccagtaccgcgacgacgacggccagctgcagccg
gtggattcgggcgaggtcaacgcctacctgcgcgaggcgatgggcgagagcttcaccgcc
aaggacttccgcacttggggcggcacccgcgccgcgctgcaacggctggccgcgctgccg
ctgcccgacaccggcggcgagcgcgcgctggcgcaggcgcagaacgcggtgatccgtgag
gtggccgaggcgctgggcaataccccggcggtgtgccgcaaggcctacatcgacccgtgc
gtgttcgacggctggcgctgcggtcgcctgcacggactatgcgagggcgtgcgcggcgaa
cggcagtgggacctgatcacgctgaagtacctgggccgggcacgcaccgcggcacgcaag
gcggccaaggccgccggccgcagctcggccaaggcgccgtcgctgcgcaagggcgcgcgt
gctgcgcgcaagggcgctgcggcgggcgcgcagggcagcggtacccgcgccaagcgcaag
accgcaactcccgcacgcaagcgcgcctga
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