Xanthomonas sontii: RAB70_06570
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Entry
RAB70_06570 CDS
T10538
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xso Xanthomonas sontii
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xso03021
]
RAB70_06570 (rpoH)
Transcription machinery [BR:
xso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RAB70_06570 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
HTH_11
HTH_AsnC-type
KORA
HTH_3
HTH_10
Phage_terminase
GntR
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
XCI85929
LinkDB
All DBs
Position
1529628..1530506
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AA seq
292 aa
AA seq
DB search
MSQTLTSNALVANNLPIPSPLGSLDAYIGAVHQIPVLTSDEERALAVRYRDQEDLDAARE
LVHSHLRFVVHVARGYNGYGLPLGDLVQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAE
MHEYILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVTAVAKDLNVSEREVLEME
SRLSGRDIGFDAPSDEDDDHAPPSPAAYLMANEEDPSQAYERADSEDNQLQLLREGLAEL
DARSRDIIKRRWLDADSKITLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacgcttacttccaacgcattggttgccaacaacctcccgatccccagtccg
ctcggttcgctggatgcctatatcggcgccgtgcatcagatcccggtgctgacgtccgac
gaggaacgtgcactggcggtgcgatatcgcgaccaggaagacctggacgcggcccgcgaa
ctggtccattcccacctgcgcttcgtggtgcacgtggcccgcggctacaacggctacggc
ctgccgctgggcgacctggtccaggaaggcaacatcggcctgatgaaggcggtcaagcgt
ttcgacccggacatgggcgtgcgcctggtcagcttcgcggtgcactggatccgtgccgaa
atgcacgagtacatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaagcgcag
cgcaagctgttcttcaacctgcgcaagtccaagacccgcctgggctggatgaacgcggcc
gaggtcaccgccgtggccaaggacctcaacgtgtccgagcgcgaggtgctggagatggag
tcgcgcctgtccggtcgcgacatcggtttcgatgcgccgtccgacgaggacgacgaccac
gcaccgccgtcgccggccgcgtatctgatggccaacgaggaagatccctcgcaggcctac
gaacgcgccgacagcgaggacaaccagctgcagctgctgcgtgaaggcctggcggaactg
gatgcgcgttcgcgcgacatcatcaagcgccgctggctggatgccgacagcaagatcacc
ctgcaggaactggccgacgagtacggcgtgtcggccgagcgcatccgccagatcgaggcg
aacgcgctgaagaagatgaaggcgctgttcgtcgcctga
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