Xanthomonas sontii: RAB70_06635
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Entry
RAB70_06635 CDS
T10538
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xso Xanthomonas sontii
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xso03032
]
RAB70_06635
03400 DNA repair and recombination proteins [BR:
xso03400
]
RAB70_06635
Enzymes [BR:
xso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RAB70_06635
DNA replication proteins [BR:
xso03032
]
Prokaryotic type
DNA Topoisomerases
RAB70_06635
DNA repair and recombination proteins [BR:
xso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RAB70_06635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XCI85942
LinkDB
All DBs
Position
complement(1546601..1549087)
Genome browser
AA seq
828 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIDKN
EKHVEAIAKAAKAAEDIYLATDPDREGEAISWHIAEILQERGLLKGKPLHRVVFTEITPR
AIKEAMAQPRQIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIAADCAHPSQHFNAKLIKLDGQKFEQFTITDGDTAESARLRIQQ
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPSQVARFLTDDERKLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDNKSAEDEDEGRKLPAMKPGDRVPLERILAEQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTQYVDYDF
TAKLEDELDAVSRGEEEWIPLMSRFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEEALELFLMPRSLGQDQGE
EVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFPGSDI
QVLNGRFGPYISDGKLNGKIPKDREPASLSLDEVQKLLEETGKPVRKGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKAAKKTAKKTVKKAAKKTMAKGG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggatttccacgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaag
gaaggcgcagtggatccggacgacggcttcgcgatgcgctacgcgctgatcgacaagaac
gagaagcacgtggaggccatcgccaaggcggccaaggcggccgaagacatctacctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgcaggag
cgcgggctgctcaagggcaagccgctgcaccgggtggtgttcaccgagatcaccccgcgc
gcgatcaaggaagcgatggcgcaaccgcgccagatcgccggcgacctggtcgatgcgcag
caggcccgccgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaagccttcatcgcccgcgagtactggtccatcgccgccgac
tgcgcgcatccctcgcagcacttcaacgccaagctgatcaagctcgacgggcagaagttc
gagcagttcaccatcaccgacggcgacaccgccgaatctgcgcgcctgcgcatccagcag
gccgcgcagggcgcgctgcacgtcaccgacgtcgccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccacgctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtacgaaggcgtggcgatcggcgacgaa
ggcacggtcggcctgatctcgtacatgcgtaccgactcggtcaacctgtcgcaggacgca
ctggccgagatccgcgacgtgatcgcccgcgactacggcatcgcctcgctgccggaccag
cccaacacctaccagaccaagtccaagaacgcccaggaagcgcacgaagcggtgcgtccg
acctcggcgttgcgtaccccgtcgcaggtggcgcgcttcctgaccgacgacgagcgcaag
ctgtacgagctgatctggaagcgtgcggtggcctgccagatgatcccggccacgctcaac
accgtcagcgtcgacctgtcggccggcagcgaacacgtgttccgcgccagcggtaccacc
gtggtggtccccggcttcctggccgtgtacgaggaaggcaaggacaacaagagcgccgag
gacgaggacgaaggccgcaagctgccggcgatgaagcccggcgaccgcgtgccgctggaa
cgcatcctggccgagcagcacttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtgaaagcgctggaagagtacggcatcggccgtccctcgacctacgcctcgatcatccag
accctgctgttccgcaagtacgtggagatggaaggccgcagcttccgcccgtccgacgtc
ggccgcgcggtgtccaagttcctgtccagccacttcacccagtacgtggactacgacttc
accgccaagctcgaagacgagctggacgcggtctcgcgcggcgaggaggagtggatcccg
ctgatgtcgcgcttctgggaaccgttcaaggaactggtcgaggacaagaaggaatcggtc
gaccgcgccgaagccagcggtgcgcgcgagctgggcaccgaccccaagaccggcaagccg
gtgagcgtgcgcctgggccgcttcgggccgtacgcggcgatcggcagcaccgcggaggac
gccgaggacaagcccaagttcgcgtcgctgcgtcccggccagagcatgcacaccatcacc
ctggaggaggcgctggagctgttcctgatgccgcgcagcctcggccaggaccagggcgag
gaggtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcgtctacgcc
tcgctgaagaaggaagacgatccctacaccatcgatctggcccgtgcggtgttcctgatc
gaggagaaggaagagatcgcgcgcaaccgcatcatcaaggaatttcccggcagcgacatc
caggtactcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggatcgcgagcccgcctcgttgagcctggacgaagtgcagaagctgctggaggaa
accggcaagccggtgcgcaagggcttcggcgccaagaaggccgccgccaagaaggaagcc
gcgccgaagaagagcgcggcgaagaaggccgcggccgacgccccggccaagccggcggcg
aagaaggcggtcaagaaggccgcgaagaaaaccgccaagaaaacggtgaagaaggcggcg
aagaagaccatggccaagggcggctga
DBGET
integrated database retrieval system
