Xanthomonas sontii: RAB70_08145
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Entry
RAB70_08145 CDS
T10538
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xso Xanthomonas sontii
Pathway
xso00730
Thiamine metabolism
xso01100
Metabolic pathways
xso01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RAB70_08145 (thiC)
Enzymes [BR:
xso01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RAB70_08145 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
DUF5817_CT
Motif
Other DBs
NCBI-ProteinID:
XCI86222
LinkDB
All DBs
Position
1923798..1925675
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AA seq
625 aa
AA seq
DB search
MNAVPNPLQQQTDTLSAAVTRPIPGSRKIFVPGSRADLQVPMREIALTRTPTVFGGEENA
PVTVYDTSGPYTDPQARIDLGAGLAPLRAAWIAERGDSVALAGLSSQFGRAREDDARLQA
VRFPARRLPRRARDGANVTQMHYARRGIVTPEMEFVAIRENQRLQDLRDAQLRVQHPGEA
FGAAIPRQITPEFVRDEIARGRAILPCNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWAIRWGGDTVMDLSTGKHIHETREWIVRNSPVPIGTVPIYQALEKVDGRAEE
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSILAKWCLAHHRE
NFLYTHFEDICEIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTRLAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRADVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAREFHDETLPKGAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGVDAE
AALQAGMAEKSAQFLAAGAQVYRAE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtacccaatccgctgcagcagcagaccgacaccttgtccgcggcggtgacc
cgcccgatccccggttcgcgcaagatcttcgtgccgggctcacgcgccgatctgcaggtg
ccgatgcgcgagatcgcgctgacccgcacgcccaccgtgttcggcggcgaggaaaatgcc
ccggtcaccgtctacgacacgtccgggccgtacaccgacccgcaggcgcggatcgatctc
ggcgccggcttggcgccgctgcgcgccgcctggatcgccgagcgcggcgacagcgtggcg
ctggccgggctcagttcgcagttcgggcgcgcgcgcgaggacgatgcgcgcctgcaggcg
gtgcgcttcccggcacggcgtctgccgcgacgcgcccgcgacggcgccaacgtcacccag
atgcattacgcacggcgcggcatcgtcaccccggaaatggagttcgtggcgatccgcgag
aaccagcgcctgcaggacctgcgcgatgcgcaattgcgcgtgcagcatcccggcgaagcg
ttcggcgccgccatcccgcggcagatcacgcccgagttcgtgcgcgacgagatcgcccgc
ggccgcgccatcctgccgtgcaacatcaaccatccggaaagcgagccgatgatcatcggc
cgcaacttcctgaccaagatcaacgccaacatcggcaacagcgcggtcagctccggcatc
gccgaggaagtggagaaactggtgtgggcgatccgctggggcggggacacggtgatggac
ctgtccaccggcaagcacatccacgagacccgcgaatggatcgtacgcaactcgccggtg
ccgatcggcaccgtgccgatctaccaggcgctggagaaggtggatggccgcgccgaggaa
ctgacctgggaaatcttccgcgacaccctgatcgagcaggccgaacagggcgtggactac
ttcaccatccatgccggcgtgctgctgcgctacgtcccgctgaccgccaagcgcgtcacc
ggcatcgtctcgcgcggcggctcgatcctggccaagtggtgcctggcgcatcatcgcgag
aacttcctctacacccacttcgaggacatttgcgagatcatgaaggcctacgacgtggcc
ttttcgctgggcgacggcttgcgcccgggttgcatcgccgacgccaacgacgccgcccag
ttcggcgaactggaaacgctgggcgaactgaccaggctcgcctggaagcacgacgtgcag
accatgatcgagggccccggccacgtgccgatgcaattgatcaaggagaacatggacaag
cagctgcgcgagtgcggcgaggcgccgttctacacgctggggccgctgaccaccgacatc
gcgcccggctacgaccacatcacctcggcgatcggcgcggcgatgatcggctggttcggc
accgcgatgctgtgctacgtcacacccaaggagcatctgggcctgcccaaccgtgccgac
gtgcgcgacggcatcatggcctacaagatcgccgcgcacgccgcggacctggccaagggc
catcccggcgcgcaggtgcgcgacaacgccttgtccaaggcgcgcttcgagttccgctgg
gacgaccagttccatctcggcctggatccggagaaggcgcgcgagttccacgacgagacc
ctgcccaagggcgcgcacaagctggcgcatttctgttcgatgtgcggaccgcacttctgc
tcgatgaagatcacccaggacgtgcgcgactacgccgccgagcacggggtcgacgcggaa
gcggcgctgcaggccggcatggccgagaagtcggcgcagttcctggcggctggcgcgcag
gtgtaccgcgccgagtga
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