Xanthomonas sontii: RAB70_09070
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Entry
RAB70_09070 CDS
T10538
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xso Xanthomonas sontii
Pathway
xso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RAB70_09070
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xso02022
]
RAB70_09070
02035 Bacterial motility proteins [BR:
xso02035
]
RAB70_09070
Two-component system [BR:
xso02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
RAB70_09070
Bacterial motility proteins [BR:
xso02035
]
Pilus system
Twitching motility proteins
RAB70_09070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_19
HTH_30
Motif
Other DBs
NCBI-ProteinID:
XCI86400
LinkDB
All DBs
Position
complement(2143378..2144766)
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AA seq
462 aa
AA seq
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MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPD
GNGIELVSEIAKHYPRTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDIQVLRGLVKHAL
ELNSDSRAAPPPPAPEQASRLLGASAAMDALRSTIAKVARNQAPVYILGESGVGKELVAR
TIHEQGARSAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADQAGLFQAAHGGTLFLD
EVAELPLPMQVKLLRAIQEKSVRPVGAATEVPVDVRILSATHKDLADLVAEGRFRHDLYY
RINVIELRVPPLRERGGDLPQLAAAILARLAKNHGRPTPLLSPSALDALSSYAFPGNVRE
LENILERALAMAEDDQISATDLRLPQPGNHARSAAEAAPALPRGVVDIDPSSSALPSYIE
QLERAAIQKALEENRWNKTRTAAQLGITFRALRYKLKKLGME
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacccgaagcgccctggtcgtcgacgacgagcgcgacatccgcgagttgctg
gtcctgaccctgggccggatggggctgcgcatcagcaccgccgccaacctcgccgaagcg
cgcgaactgctggcgagcaatccctacgatctgtgcatcaccgacatgcgcctgcccgac
ggcaacggcatcgaactggtcagcgagatcgccaagcattacccgcgcacgccggtggcg
atgatcaccgccttcggcagcatggacctggcggtggaggcgctgaaggccggcgccttc
gacttcgtcagcaagccggtggacatccaggtgctgcgcggcctggtcaagcatgcactg
gaactcaacagcgacagccgcgccgcgccgccgccgccggccccggaacaggccagccgc
ctgctcggcgcctcggcggcgatggacgccctgcgcagcaccatcgccaaggtcgcgcgc
aaccaggcgccggtctacatcctcggcgaatccggcgtgggcaaggaactggtcgcgcgc
accatccacgaacagggcgcccgctccgccggccccttcgtcccggtgaactgcggcgcg
atcccggccgaactgatggaaagcgagttcttcggccacaagaagggcagcttcaccggc
gcccacgccgaccaggccggcctgttccaggccgcgcacggcggcaccctgttcctcgac
gaggtcgccgaactgccgctgccgatgcaggtcaagctgctgcgcgcgatccaggaaaaa
tcggtgcgcccggtcggcgccgccaccgaggtgccggtggacgtgcgcatcctctcggcc
acccacaaggacctggccgacctggtcgccgagggccgcttccgccacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtgccgccgctgcgcgagcgcggcggcgacctgccg
caactggccgcggcgatcctggcgcggctggccaagaaccacggccgccccaccccgctg
ctgtcgccctccgccctggacgcactgagcagctacgccttccccggcaacgtgcgcgaa
ctggaaaacatcctcgagcgcgccctggcgatggccgaggacgaccagatcagcgccacc
gacctgcgcctgccgcaacccggcaaccacgcccgcagcgccgccgaagccgccccggcc
ctgccgcgcggcgtggtcgacatcgaccccagctcctccgccctgccgtcctacatcgag
caactcgaacgcgccgcgatccagaaggcgctggaagagaaccgctggaacaagacccgc
accgccgcgcaactgggcatcacctttcgcgcgctgcgctacaagctgaagaagctgggg
atggagtag
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