Xanthomonas sontii: RAB70_09265
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Entry
RAB70_09265 CDS
T10538
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xso Xanthomonas sontii
Pathway
xso00300
Lysine biosynthesis
xso00470
D-Amino acid metabolism
xso01100
Metabolic pathways
xso01110
Biosynthesis of secondary metabolites
xso01120
Microbial metabolism in diverse environments
xso01230
Biosynthesis of amino acids
Module
xso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RAB70_09265
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RAB70_09265
Enzymes [BR:
xso01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RAB70_09265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XCI86437
LinkDB
All DBs
Position
complement(2192987..2194240)
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AA seq
417 aa
AA seq
DB search
MSLRIDPAPLHAALAQLRTQADGPVCAYVYDLAALQAHAAMLRAHLPAECELFYAAKANA
EPPVLRTLAPWVDGFEAASGGELQWLHTHQPGRRLLFGGPGKLDTELQLAASLPDCSVHV
ESLGELQRLARITASRTGPLSVFLRLNIVVPGMQDTRLVMGGRPSPFGLDVDDLDAAMQV
LRGASGLRLDGFHFHLLSHQRDAQLQLRLIAHYLQTVQGWRQAYALGPLTVNAGGGFGVD
YADPAASFDWAAFCAGLPALLRTHGQGLRLRLEPGRYVSVACGWYLMEVLDIKRSHGAQF
AVGRGGTHHFRTPAAQGHDHPFLVLRGTQPPVLRDARVTLVGQLCTPKDVLARDQPVAAL
APGDFLAFPLAGAYAWNISHQQFLMHPPPQMLFLDGPAQAADALPQRRIADSAAAAS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgatcccgcaccactgcacgcggcgctggcgcagttgcgcacgcag
gccgacggcccggtctgcgcctacgtctacgacctggccgcgctgcaggcgcatgcggcg
atgctgcgcgcgcacctgccggccgagtgcgagctgttctatgcggccaaggccaacgcc
gagccccccgtgctgcgcacgctggcaccgtgggtggacggtttcgaggcggcctccggc
ggcgaactgcaatggctgcacacgcaccagccgggccgtcgactgctgttcggtggcccc
ggcaagctcgataccgaactgcagctggccgccagcctgcccgactgcagcgtgcacgtg
gaaagcctgggcgagctgcagcgactggcgcgcatcaccgcgtcgcgcacaggcccgttg
tcggtgttcctgcgcctgaacatcgtggtgccgggcatgcaggacacgcgcctggtgatg
ggcgggcgaccctcgccgttcggcctggacgtggacgacctggatgccgcgatgcaggtg
ctgcgcggcgcgagcgggctgcgcctggacggcttccacttccacctgctgtcgcaccag
cgcgatgcgcagctgcagttgcggctgatcgcgcactacctgcagaccgtgcagggctgg
cgccaggcctacgcgctgggcccactgacggtgaatgccggcggcggcttcggcgtggac
tacgccgatccggcggcctcgttcgactgggccgcgttctgcgcggggttgccggcgctg
ctgcgcacgcacggccaaggtctgcgcctgcgcctggagccgggccgctatgtcagcgtc
gcctgcggctggtacctgatggaggtgctggacatcaagcgcagccatggcgcgcagttc
gccgtcggccgcggcggcacccatcatttccgcacgcctgccgcgcaaggccacgaccat
ccgttcctggtgctgcgcggcacccagccgccggtgctgcgcgatgcgcgggtgaccctg
gtcgggcaactgtgcacgcccaaggacgtactggcccgcgaccagccggtggccgcactg
gcgccgggcgacttcctggcgttcccgctggccggcgcctacgcctggaacatctcgcac
cagcagttcctgatgcatccaccgccacagatgctgttcctcgacgggccggcgcaggcc
gccgacgccttgccgcagcgccgcattgccgactcggccgccgccgcgtcatga
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