Xanthomonas sontii: RAB70_10620
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Entry
RAB70_10620 CDS
T10538
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xso Xanthomonas sontii
Pathway
xso03030
DNA replication
xso03430
Mismatch repair
xso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RAB70_10620 (dnaE)
03430 Mismatch repair
RAB70_10620 (dnaE)
03440 Homologous recombination
RAB70_10620 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xso03032
]
RAB70_10620 (dnaE)
03400 DNA repair and recombination proteins [BR:
xso03400
]
RAB70_10620 (dnaE)
Enzymes [BR:
xso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RAB70_10620 (dnaE)
DNA replication proteins [BR:
xso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RAB70_10620 (dnaE)
DNA repair and recombination proteins [BR:
xso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RAB70_10620 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XCI82740
LinkDB
All DBs
Position
complement(2530137..2533724)
Genome browser
AA seq
1195 aa
AA seq
DB search
MSTSRFAHLHIHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADLLIADGTQAPWRLTVLCRNRDGYLSLSRLLTRAWLEG
HRSEGGVALRPEWLQTGSDNLFALAGRESLAGRLASEGRHDLAEQQLADWQRIFGDGLHL
ELTRTGRDGEEAFNQFALHAAGTRGLPVIASNDVRFLYASDFAAHEARVCISSGRVLDDP
KRPRDYSDQQYLKSAEEMAALFADIPDAIDNTLALAQRCNIEMQLGTYFLPAYPVPDDET
LDSWIRSQSRDGLAARLEKNPLAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRDRVSQIITYGTMAAKAVVRDCGRVLGFPYGLVDGVAKLIPNILGIT
LKDAMGEGKDSEMASPELIQRYQAEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPTPLS
DFCPLFAEHDVDTFGKNPVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GVPPVEIAAIPLDDAPTYKGIFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPSFNARKHGQEEIVYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGGYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVGEAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVLPPRINASAYMFEA
ATPDTIQYGLGAIKGVGRGACEAIVAERERGGEYASLLDFCTRVESAKLNKRTLEAMINA
GAMDGLGANRATLMLQLPEVMKATEQMARERASGQNSLFGGADTSAPALRLDLPESKEWP
LGQLLAGERETLGFYLSGHPFDPYRDEVRELVGCDLSALEKICAQSGGGRGGGDGEKRAW
RPEVSAILAGQVVGVRRKGDSQVFVQLEDGRGRIECSAFSDAIAEFGHLLTRDRILIVKG
GVREDEFNGGYAMRIRQCWDYEQICTHHAQRLSLRLDLRQRSAWPRIDGLLARHRPGKTP
LRLDLLLQSAQGGIAGMLDLNGSHSVRVDPQLLDALRGDPAVRAVKVKYSPPWAN
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgcccatctgcacatccacaccgagttctcgctggcggattcg
accatccgtgtgcccgagaaaccggatcaggctgacccgaagaaagccaagcaggccaac
ctgctcagccgcgcggtggagctggacctgcccgcgctggcggtcaccgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgagggcgtgggcatcaagccgatcgcc
ggcgccgacctactgatcgccgacggcacccaggcgccgtggcgactgaccgtgctgtgc
cgcaatcgcgacggctacctgagcctgtcgcgactgctgacccgtgcctggttggaaggc
caccgcagcgaaggcggcgtggcgctgcgcccggaatggctgcagaccggcagcgacaac
ctgttcgccctggccggccgcgagagcctggccgggcgcctggccagcgaaggccgccac
gatctggccgagcagcaactggccgactggcagcgcatcttcggcgatggtctgcacctg
gaactgacccgcaccggccgcgacggcgaggaggcgttcaaccagttcgccctgcacgcc
gccggcacccgcggcctgccggtgatcgccagcaacgacgtgcgcttcctgtacgccagc
gacttcgccgcgcacgaggcgcgcgtgtgcatctcctccggacgcgtgctcgacgatccc
aagcgaccgcgcgactacagcgaccagcagtacctgaagtcggccgaggaaatggccgcg
ctgttcgccgacatccccgacgcgatcgacaacaccctggcgctggcgcaacgctgcaac
atcgagatgcagctgggcacctacttcctgcccgcctatccggtgcccgacgacgagacg
ctggacagctggatccgcagccagtcgcgcgacggcctggccgcgcgcctggagaagaac
ccgctggcgcccggcaagacccgccaggactacgtggaccggctcgagttcgagctggac
accatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcatcccgatcggcccgggccgcggttccggcgccggttcgctggtg
gcgtgggcgctgcagatcaccgacctggatccgctgccgtacaacctgctgttcgagcgc
ttcctcaacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggatcgc
cgcgacgaggtgatcgactacgtggcgcgcaagtacggccgcgaccgggtcagccagatc
atcacctacggcaccatggcggccaaggcggtggtgcgcgactgcggccgcgtgctcggc
ttcccgtacggcctggtcgacggcgtcgccaagctgatccccaacatcctcggcatcacg
ctgaaggatgcgatgggcgaaggcaaggacagcgagatggcctcgccggagctgatccaa
cgctaccaggccgaggacgacgtccgcgacctgatggacctggcgcggcagctcgaggac
ctcacccgcaacgccggcaagcacgctggcggcgtggtgatcgcgccgacgccgctgtcg
gacttctgcccgctgttcgccgaacacgacgtcgacaccttcggcaagaacccggtcacc
cagttcgacaaggacgacgtcgagcaggtcggcctggtcaagttcgacttcctcggcctg
cgcaccctgaccatcatcgactgggcggtgaaggcgatcaacgtgcgccacgcgcgcgcc
ggcgtcccgccggtggagatcgccgcgatcccgctcgacgacgcgccgacctacaagggc
atcttcgcctcgggcaacaccggcgcggtgttccagttcgaatcctcgggcatgcgccgg
ctgctgaaggacgcccgccccgaccgcttcgaggacctgatcgcgctggtgtcgctgtac
cgccccggcccgatggacctgattccctcgttcaacgcgcgcaagcacgggcaggaggag
atcgtctatcccgatccgcgcaccgaagcgatcctgaaggacacctacggcatcatggtg
taccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctgggcggcgcc
gacctgctgcgccgcgcgatgggcaagaaggtgccggcggaaatggccaagcaccgcgag
atcttccgcgagggtgcggccaagggcggcgtcggcgaggccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcg
ctggtcagctaccagaccgcgtggctgaaacgccattacccggccgagttcatggcggcc
acgctgtcctcggacatggacaacaccgacaaggtggtcggcttcctcgacgaggtgcgc
aacctcggcctgaccgtgctgccgccgcgcatcaacgcctcggcctacatgttcgaggcg
gccacgccggacaccatccagtacggcctgggcgcgatcaaaggcgtgggccgcggcgcc
tgcgaggcgatcgtggccgagcgcgagcgtggcggcgagtacgcctcgctgctggatttc
tgcacccgcgtggaatcggccaagctcaacaagcgcaccctcgaggcgatgatcaacgcc
ggcgcgatggacgggctgggcgccaaccgcgccacgctgatgctgcagttgccggaggtg
atgaaggccaccgagcagatggcgcgcgagcgcgcctccgggcagaactcgctgttcggc
ggcgccgacaccagcgccccggcgctgcgcctggacctgccggagagcaaggaatggccg
ctgggccagttactggccggcgaacgcgagacgctgggcttctacctcagcggccatccg
ttcgatccgtaccgcgacgaagtgcgcgaactggtcggctgcgacctgagcgcgctggag
aagatctgcgcgcaatccggcggcggccgcggcggtggcgacggcgagaagcgcgcctgg
cgcccggaggtcagcgcgatcctcgccggccaggtggtcggcgtgcgccgcaagggcgac
agccaggtattcgtgcaactggaggacggccgcggccgcatcgagtgcagcgcgttctcc
gacgccatcgccgagttcggccacctgctgacccgcgaccgtatcctgatcgtcaagggc
ggcgtgcgcgaggacgaattcaacggcggctacgccatgcgcatccgccagtgctgggac
tacgaacagatctgcacgcaccacgcgcagcgcctgtcgctgcgcctggacctgcgccag
cgcagcgcctggccgcgcatcgacggcctgctcgcccgccaccgcccgggcaagaccccc
ctgcgcctggacctgctgctgcagtcggcgcagggcggcatcgccggcatgctcgacctc
aacggcagccattcggtgcgcgtggacccgcaactgctggacgccctgcgcggcgacccg
gcggtgcgcgcggtgaaggtcaagtacagcccgccgtgggcgaactga
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