Xanthomonas sontii: RAB70_14430
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Entry
RAB70_14430 CDS
T10538
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xso Xanthomonas sontii
Pathway
xso03410
Base excision repair
xso03430
Mismatch repair
xso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RAB70_14430 (recJ)
03430 Mismatch repair
RAB70_14430 (recJ)
03440 Homologous recombination
RAB70_14430 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xso03400
]
RAB70_14430 (recJ)
DNA repair and recombination proteins [BR:
xso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RAB70_14430 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RAB70_14430 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RAB70_14430 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
DUF2399
Motif
Other DBs
NCBI-ProteinID:
XCI83450
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All DBs
Position
complement(3448713..3450446)
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AA seq
577 aa
AA seq
DB search
MSSSARIVRRPAAAAAGPWHEATLPLLRRIYAARGAHDSGLAQPKLAQLLPPDALSGIDA
AVELLAEAIAAGKRILVVGDFDCDGATACAVAVRGLRLLGAAQVLHAVPNRMVHGYGLSP
ALVAELAPLQPDLLVTVDHGIACHAGVAAAKALGWQVLVTDHHLPGPALPPADAIVDPNL
AGDAFPSKMLAGVGVIFYVLLALRRHLRVRGAFVAAPPDLSVLLDLVAVGTVADLVPLDP
NNRALVSAGLRRLQRGEGCLGLRALIEASGRDPARLSASDIGFALAPRLNAAGRLEDMAL
GIELLLCEDPQQARTIAATLEEINAERRAVQQQMTDEAEAVVAQALLAAPEQPPVAVCLF
DAQWHPGVIGLVASKMKDRLHRPVIAFAPAEPGSTQLRGSARSIPGFHIRDAMAAVEAQR
PGLMEKFGGHAMAAGLSLPQDALAEFEEVFRAHALASLDAELLQAELLSDGALEPHELDH
RHAEALRQGGPWGQGFPEPLFDGEFEVVQWRLLKERHVKLSLRCPGRAEPLNAIHFNGWH
GREPGRRVHVAYRLVADDYRGGDAVQLVVEHCLPLDG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagttccagcgcgcgcatcgtgcggcggcccgcggcggccgcggccggcccgtggcac
gaggcgacgttgccgctgttgcggcgcatctatgccgcgcgcggcgcccacgacagtggc
ctggcgcagcccaagctggcgcagttgctgccgccggatgcgctgagcggcatcgacgcc
gccgtggaattgctggccgaggcgatcgccgcgggcaagcgcatcctggtggtcggcgat
ttcgattgcgacggcgccaccgcctgcgcagtggcggtgcgcgggctgcgcctgctcggc
gccgcgcaggtgctgcacgcggtgcccaaccgcatggtccatggctacggtctgtcgccg
gcgctggtcgcggaactggcgccgttgcagccggacctgctggtcacggtggaccacggc
atcgcctgccatgccggcgtcgccgcggccaaggcgctgggctggcaggtgctggtcacc
gaccaccacctgccgggtccggccttgccgccggccgacgccatcgtcgatccgaacctg
gccggcgacgccttcccgagcaagatgctggccggggtcggcgtgatcttctacgtgctg
ttggcgctgcgccggcacctgcgcgtgcgcggcgcgttcgtggcggcaccgccggacctg
agtgtgctgctggacctggtcgcggtcggcaccgtcgccgaccttgtgccgctggatccc
aacaaccgcgcgctggtctcggccggtttgcgccggttgcagcgtggcgaaggttgcctc
ggcctgcgcgccctgatcgaagccagcggccgcgacccggcgcggctcagcgccagcgac
atcggcttcgccctggcgccgcggctcaacgccgccggccgcctcgaggacatggccctg
ggcatcgagttgttgctgtgcgaggacccgcaacaggcgcgcacgatcgccgcgacgctg
gaggagatcaacgccgagcgccgcgccgtgcagcagcagatgaccgacgaggccgaagcg
gtcgtggcgcaggcgctgctggccgcgcccgagcagccgccggtggcggtgtgcctgttc
gatgcgcagtggcatcccggcgtgatcggcctggtcgcctcgaagatgaaggaccgcctg
catcggccggtgatcgccttcgccccggccgagccgggcagcacccagttgcgcggctcg
gcgcgttcgatccccggcttccacatccgcgacgcgatggcggcggtggaggcgcagcgg
ccgggcctgatggagaagttcggcggccatgccatggccgcgggcctgagcctgccgcag
gacgcgctggccgagttcgaagaggtgttccgcgcgcatgcgctggccagcctggacgcg
gaactgctgcaggccgaactgctcagcgacggcgcgctggagccgcacgaactcgaccac
cgccatgccgaggcgctgcgccagggcgggccatgggggcagggcttccccgagccgctg
ttcgatggcgaattcgaagtagtgcagtggcgcttgctgaaggagcgccacgtcaagctg
agcctgcgttgccccggccgtgccgaacccttgaacgcgatccatttcaacggctggcac
ggtcgtgaaccgggccgccgcgtgcacgtcgcctatcggctggtcgccgacgactaccgc
ggcggcgatgcggtgcaactggtggtggagcactgtctgccgttggatggctga
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