Xanthomonas sontii: RAB70_17240
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Entry
RAB70_17240 CDS
T10538
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xso Xanthomonas sontii
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xso03009
]
RAB70_17240 (rimO)
Enzymes [BR:
xso01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RAB70_17240 (rimO)
Ribosome biogenesis [BR:
xso03009
]
Prokaryotic type
ribosomal protein modification factors
RAB70_17240 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CSD2
YajR_YAM
PrmA
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XCI83968
LinkDB
All DBs
Position
complement(4109583..4110989)
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AA seq
468 aa
AA seq
DB search
MTETTSQAARQPRIGMVSLGCPKALVDSERILTQLRVEGYAIVPSYDAADVVVVNTCGFI
DSAVAESMEAIGEAMAENGKVIVTGCLGKRSEQIRAAYPDVLAVSGPQDYQSVMEAVHAA
LPPRHDPFVDLLPRARGAEDDIGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRP
VDEVLREAERLVKGGVRELLVVSQDTSAYGVDLKYAEREWRGRSYQTRMKALCEGLSELG
AWARLHYVYPYPHVDDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVERTLERVQR
WRALCPEITLRSTFIVGFPGETDAEFEQLLEFLDAAQLDRVGAFAYSPVEGASANALPDP
VPEELKQERLARFMERQAAISAARLEAKIGTVQECLVDLLEDGIAVARSKADAPEIDGLV
HIQNGGELGLKPGDLVQVEITDSDEHDLFGDGLPAQASSATPLDLRVL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacaacttcacaggcggcccgccagccgcgtataggtatggtaagccttggg
tgcccgaaggcccttgtcgattccgaacgcatcctcacccaactgcgcgtggagggctat
gcgatcgtgcccagctacgacgcggccgacgtggtggtggtcaatacctgcggcttcatc
gattcggcggtggccgagtcgatggaagcgatcggcgaggccatggccgagaacggcaag
gtcatcgtcaccggctgcctgggcaagcggtcggagcagatccgcgcggcctatccggac
gtgctggcggtctccggtccgcaggactaccagagcgtgatggaagcggtgcatgcggcg
ctgccgccgcgccacgacccgttcgtggacctgctgccgcgcgcgcggggcgccgaggac
gacatcggggtcaagctgacgccgcggcattacgcctacctgaagatctccgaaggctgc
aatcaccgctgcagcttctgcatcattccgtcgatgcgcggcgacctggtgtcgcgcccg
gtcgacgaggtgctgcgcgaggccgagcgtttggtcaagggtggggtgcgcgagttgctg
gtggtgtcgcaggacacctcggcctatggcgtggacctgaagtacgccgagcgcgaatgg
cgcggccgcagctaccagacgcggatgaaggcgctgtgcgaggggctgtcggaactgggc
gcgtgggcgcgcctgcactacgtgtatccgtacccgcacgtggacgacgtgatcccgctg
atggccgagggcaagctgctgccgtacctggacatcccgttccagcacgccagcccgcgc
atcctcaagctgatgaagcggccgggcgcggtcgagcgcaccctggagcgcgtgcagcgc
tggcgcgcgctttgcccggagatcaccctgcgttcgaccttcatcgtcggcttccccggc
gagaccgacgccgagttcgagcagttgctggagttcctggacgccgcgcagctcgaccgc
gtcggtgccttcgcctattcgccggtggaaggcgccagcgccaatgcgctgccggatccg
gtgccggaggaactcaagcaggagcggttggcgcgcttcatggagcggcaggcggcgatt
tccgccgcgcgcctggaagccaagatcggcacggtgcaggagtgcctagtcgacctgctg
gaggacggcatcgcagtggcgcgctccaaggccgatgcgccggagatcgacggcctggtg
catatccagaacggcggcgagcttgggctgaagccgggcgatctggtgcaggtggagatc
accgacagcgacgagcatgacctgttcggcgatgggctgccggcgcaggcgtcgtcggca
acgccgctggatctgcgggtgctctga
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