Xenorhabdus taiwanensis: TCT1_05330
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Entry
TCT1_05330 CDS
T11488
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xta Xenorhabdus taiwanensis
Pathway
xta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TCT1_05330 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xta03019
]
TCT1_05330 (groL)
03110 Chaperones and folding catalysts [BR:
xta03110
]
TCT1_05330 (groL)
03029 Mitochondrial biogenesis [BR:
xta03029
]
TCT1_05330 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xta04147
]
TCT1_05330 (groL)
Enzymes [BR:
xta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
TCT1_05330 (groL)
Messenger RNA biogenesis [BR:
xta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
TCT1_05330 (groL)
Chaperones and folding catalysts [BR:
xta03110
]
Heat shock proteins
HSP60 / Chaperonin
TCT1_05330 (groL)
Mitochondrial biogenesis [BR:
xta03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
TCT1_05330 (groL)
Exosome [BR:
xta04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TCT1_05330 (groL)
Exosomal proteins of other body fluids (saliva and urine)
TCT1_05330 (groL)
Exosomal proteins of breast cancer cells
TCT1_05330 (groL)
Exosomal proteins of colorectal cancer cells
TCT1_05330 (groL)
Exosomal proteins of bladder cancer cells
TCT1_05330 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BET95612
UniProt:
A0ABN7BZ67
LinkDB
All DBs
Position
630955..632601
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARSKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVISAVDELKKLSVPCSDSTAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKPEAGSVELENPYILLVDKKISNIRELLPVLEGV
AKASKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTNGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEESAIAARVTQIRQQIEESTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGVALV
RVASAITDLTGDNEDQNVGIRVALRAMEAPMRQIVDNAGEEPSVVVNNVKAGKDNYGYNA
ATEQYGDMIEMGILDPTKVTRSALQFAASIAGLMITTEAMVTELPKDDKADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaatgatgctcgcagcaaaatgctacgcggtgtg
aatgtactggctgatgcagttaaagtgaccctgggtcctaaaggccgtaatgtagttttg
gataaatctttcggtgcgcctgtcatcactaaagacggtgtatctgtagcacgtgaaatc
gaattggaagacaaattcgagaacatgggtgctcagatggttaaagaagtcgcttctaaa
gctaatgatgcggcaggtgatggtaccaccacagcaaccgtattggctcaagctattgtc
accgaaggtctgaaagctgttgctgctggcatgaacccaatggatctgaaacgcggtatc
gataaagcagttatttccgctgttgatgaactgaaaaaactgtccgtaccttgctctgat
tccactgctattgcacaggttggtactatctctgcaaactccgacgaaaccgtaggtaaa
ctgatcgcagaagcgatggacaaagtcggtaaagaaggtgtaatcaccgttgaagaaggt
actggcctggaagacgaactggatgttgttgaaggtatgcagttcgaccgtggttacctg
tctccttatttcatcaacaaaccagaagcaggttctgttgaactggaaaacccatacatc
ctgctggttgataagaaaatctccaacatccgtgaactgttgccagttctggaaggcgtc
gctaaggcaagcaagcctttgatgattatcgccgaagatgttgaaggtgaagcactggca
actctggttgttaacaacatgcgtggtatcgtgaaagttgctgcggttaaagcacctggc
ttcggtgatcgccgtaaagccatgttgcaagatatcgctaccctgaccaacggtactgtt
atctctgaagagattggtctggagctggaaaaagcgactctggaagatctgggccaagca
aaacgtgttgttatcaacaaagacaccacaactatcattgatggtgtaggtgaagaaagc
gcaattgctgcacgtgttactcagatccgtcagcaaatcgaagaatcgacttctgattat
gaccgtgaaaaactgcaagagcgtgtcgctaaactggcaggcggtgttgctgtaatcaaa
gtaggtgcagcaactgaagttgaaatgaaagaaaaacgtgctcgcgttgatgatgcactg
catgcaactcgtgcggctgtagaagaaggtgttgttgctggtggtggtgttgctctggtt
cgtgttgccagcgcgatcactgacctgactggtgacaacgaagatcagaacgttggtatt
cgcgttgcactgcgtgcaatggaagcgccaatgcgtcagatcgtagacaacgcaggtgaa
gaaccttctgttgttgtaaacaacgtgaaagcaggtaaagacaactacggttataacgct
gcaactgaacagtacggcgatatgatcgaaatgggtatcttggatccaactaaggtaacc
cgttctgcactgcaattcgcagcttctatcgctggtttgatgatcactaccgaagcaatg
gtgactgaactgcctaaagatgacaaagctgacttaggcgctgctggtggcatgggcggc
atgggcggaatgggcggcatgatgtaa
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