Xanthomonas theicola: G4Q83_02280
Help
Entry
G4Q83_02280 CDS
T06965
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xth
Xanthomonas theicola
Pathway
xth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4Q83_02280 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xth03019
]
G4Q83_02280 (pnp)
03016 Transfer RNA biogenesis [BR:
xth03016
]
G4Q83_02280 (pnp)
Enzymes [BR:
xth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G4Q83_02280 (pnp)
Messenger RNA biogenesis [BR:
xth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G4Q83_02280 (pnp)
Transfer RNA biogenesis [BR:
xth03016
]
Prokaryotic type
tRNA degradation factors
G4Q83_02280 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
KH_PNO1_2nd
DUF7680
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
QNH23829
LinkDB
All DBs
Position
505563..507671
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKMDDTVLLVTAVAARSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFNGPIGAAKVGYKNGEYLLNPTVSELKDSQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHREMQKVINIINELTVEAGTKPSDWVAPAKNDG
MIAALKEAVGEQLASAFQVRDKLQRRDAISAIKKDVLAQLAPRATVEGWVAADLSKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISVKAGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALAQAKAGRLHILGEMAS
ALTTPRSELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSDRV
EKVSDVLKEGDLVKVKVLEVDKQGRIRLSMKAVEEGEGMTAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctcgaaaccggc
gagatcgcccgccaggccggcggcgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaggagcgcgcgcgaaggccaggacttcttcccgctgacggtc
gattaccaggagaagttctacgccggcggccgcatccccggcggcttcttcaagcgcgag
ggccgtgcgaccgagaaggagacgctgatttcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtgcagatcatcgccacggtgatgtcgatgaac
ccggacatcgacggcgacatcgccgcgctgatcggcgcctcggccgcgctgtcgctggcc
ggcaccccgttcaacggcccgatcggcgccgccaaggtcggctacaagaacggcgaatac
ctcctcaacccgaccgtgtcggagctgaaggactcgcagctggagctggtcgtggccggt
accgccaacgcggtgctgatggtcgagtccgaagcggcgctgctgtcggaagaagtgatg
ctgggcgcggtcaccttcggccatcgcgagatgcagaaggtcatcaacatcatcaacgag
ctgaccgtcgaagccggcaccaagccgtcggactgggtcgccccggcgaagaacgacggc
atgatcgcggcgctgaaggaagcggtcggcgagcagctggcgtcggccttccaggtgcgc
gacaagcttcagcgccgcgatgcgatctcggcgatcaagaaggacgtgctggcgcagctg
gcgccgcgcgccacggtcgaaggctgggtcgccgccgacctgtccaaggagttcggcgag
ctggagtaccagaccatgcgcggctcggtgctgagcaccaaggtgcgcatcgacggccgt
gcgctggacacggtgcgcccgatcagcgtcaaggccggcgtgctgccgcgcacccacggc
tcggcgctgttcacccgcggcgagacccaggcgatcgtggtcaccacgctgggcaccgcc
cgcgacggccaggtgatcgacgcggtcagcggcgagtacaaggaaaacttcctgttccac
tacaacttccccccctactcggtgggcgagtgcggccgcttcggcgcgccgaagcgtcgc
gagatcggccacggccgcctcgccaagcgcggcgtgctggcggtgatgccgagcatggaa
gagttcccgtacacgatccgcgtggtctcggaaatcaccgaatccaacggttcctcgtcg
atggcctcggtgtgcggcagctcgctggcgctgatggacgccggcgtgccggtgaaggcg
ccggtcgcgggcatcgcgatgggcctggtcaaggaaggcgacgacttcgtagtgctgtcg
gacattctgggcgacgaagaccacctcggcgacatggacttcaaggtcgccggtaccgcc
gaaggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaggagatcatg
aagcaggccctggcgcaggccaaggccggccgcctgcacatcctcggcgagatggccagc
gcgctgaccacgccgcggtcggagttgagcgactacgcgccgcgcctgctgacgatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggagaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcctcg
gtcaacgcgatcgccgcgcaggccgccaaggcgcgcatcgagcagattacctcggacgtg
gaaccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggcgcgttcgtc
accatcctgccgggcaaggacggcctggtgcacgtgtcgcagatctccagcgaccgcgtc
gagaaggtcagcgacgtgctgaaggaaggcgatctggtcaaggtcaaggtgctggaggtc
gacaagcagggccgcatccgcctgtcgatgaaggccgtcgaggaaggcgagggcatgacc
gccgagtaa
DBGET
integrated database retrieval system
