Xanthomonas theicola: G4Q83_13455
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Entry
G4Q83_13455 CDS
T06965
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xth
Xanthomonas theicola
Pathway
xth03030
DNA replication
xth03430
Mismatch repair
xth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G4Q83_13455 (dnaE)
03430 Mismatch repair
G4Q83_13455 (dnaE)
03440 Homologous recombination
G4Q83_13455 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xth03032
]
G4Q83_13455 (dnaE)
03400 DNA repair and recombination proteins [BR:
xth03400
]
G4Q83_13455 (dnaE)
Enzymes [BR:
xth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G4Q83_13455 (dnaE)
DNA replication proteins [BR:
xth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G4Q83_13455 (dnaE)
DNA repair and recombination proteins [BR:
xth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G4Q83_13455 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QNH25558
LinkDB
All DBs
Position
2864943..2868530
Genome browser
AA seq
1195 aa
AA seq
DB search
MSTSRFAHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELGLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADLLIADGTQAPWRLTVLCRDRDGYLSLSRLLTRAWLEG
HRNEGGVAIRPEWLQAGSDNLFALAGRDSLAGRLAGEGRHDLAEQQLADWQRIFGDGLHL
ELTRTGRDGEDAFNRFALHAAGMRGLPVVASNDVRFLYASDFAAHEARVCISSGRVLDDP
KRPRDYSDQQYLKSSEEMAALFADIPDAIANTLALAQRCNLQMQLGSYFLPAYPVPDDET
LDSWIRSQSRDGLAARLEKNPLAPGKTRQDYVDRLEFELDTIIEMGFPGYFLIVADFIQW
GKAQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRDRVSQIITYGTMAAKAVVRDCGRVLGFPYGLVDGVAKLIPNVLGIT
LKDAMGEGKDSEMASPELIQRYQAEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPTPLS
DFCPLFAEHDVDHLGRNPVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWAVKAINARHARA
GVPPVDIAAIPLDDAPTYKGIFASGNTGAVFQFESSGMRRLLKDAKPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEAILKDTYGIMVYQEQVMQMAQIVGAYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVGQAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLSVLPPRLNASAYMFAA
ATADTIQYGLGAIKGVGRGACEAIVAERERGGDYASLLDFCTRVESAKLNKRTLEALINA
GAMDGLGSNRATLMLQLPEVMKATEQMARERASGQNSLFGGADASAPALHLDLSESKEWP
LGQLLTGERETLGFYLSGHPFDPFREEVRELVGCDLSALEKICAQSGGGRGGGGDGEKRA
WRPETSAILAGQVVGVRRKGDSQVFVQLEDGRGRVECSAFTDAIAEFGHLLTRDRILIVK
GGVREDEFNGGYALRIRQCWDYEQICTHHAQRLSLRLDLRQRSTWPRIDALLARHRPGKT
PLRLDLLLQSEQGAVAGMLDLNGSHSVRVDPQLLDTLRADPGVCAVKVKYSPPWA
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgctcatctgcacgtccacaccgagttctcgctggcggactcc
accatccgcgtgcccgagaagccggatcaggcggacccgaagaaagccaagcaggccaac
ctgctcagccgcgcggtcgagctcggcttgcccgcgctcgcggtcaccgacctgaacaac
ctgttcgccttggtcaagttctacaaggcggccgagggcgtgggcatcaagccgatcgcc
ggcgccgacctgctgatcgccgacggcacccaggcgccgtggcggctcaccgtgctgtgc
cgcgaccgcgacggctacctgagcctgtcgcggctgctgacccgtgcctggctggagggc
catcgcaacgaaggcggcgtggcgatccggccggagtggctgcaggccggcagcgacaac
ctattcgccctggccggacgcgacagcctggccgggcgcctggccggcgaaggccgccac
gacctggccgagcagcaactggccgactggcagcgcatcttcggcgacggcctgcacctg
gagctgacccgcaccggccgcgacggcgaggacgcgttcaaccggttcgcgctgcacgcc
gcgggcatgcgcgggctgccggtggtggccagcaacgacgtgcgcttcctgtacgccagc
gacttcgccgcgcacgaggcgcgcgtgtgcatttcctccggccgcgtgctcgacgatccc
aagcgcccgcgcgactacagcgaccagcaatacctgaagtcgtccgaggaaatggccgcg
ctgttcgccgacatccccgacgcgatcgccaacacgctggcgctggcgcagcgctgcaat
ctccagatgcaattgggcagctacttcctgcccgcctatccggtgcccgacgacgagacg
ctggacagctggatccgcagccagtcgcgcgacggcctggccgcgcgcctggagaagaac
ccgctggcgccgggcaagacccgccaggactacgtcgaccggctcgagttcgagctggac
accatcatcgagatgggcttccccggctacttcctgatcgtggccgacttcatccagtgg
ggcaaggcgcagggcatcccgatcggcccgggccgcggctccggcgccggctcgctggtg
gcgtgggcgctgcagatcaccgacctggacccgctgccgtacaacctgctgttcgagcgc
ttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgc
cgcgacgaggtcatcgactacgtcgcgcgcaagtacgggcgcgaccgggtcagccagatc
atcacctacggcaccatggcggccaaggccgtggtgcgcgactgcggccgcgtgctcggc
ttcccgtatggcctggtcgacggcgtggccaagctgatcccgaacgtcctcggcatcacc
ctgaaggacgcgatgggcgaaggcaaggacagcgagatggcctcgccggagctgatccag
cgctaccaggccgaggacgacgtgcgcgacctgatggacctggcgcggcagctggaggac
ctgacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgccgacgccgctgtcc
gacttctgcccgctgttcgccgaacacgacgtcgaccacctgggcaggaatccggtcacc
cagttcgacaaggacgacgtcgagcaggtcggcctggtcaagttcgacttcctcggcctg
cgcacgctgaccatcatcgactgggcggtgaaggcgatcaacgcgcgccatgcgcgcgcc
ggcgtcccgccggtggacatcgccgcgatcccgctcgacgacgcacccacctacaagggc
atcttcgcctcgggcaacaccggggcggtgttccagttcgaatcctcgggcatgcgccgg
ctgctgaaggacgccaagcccgaccgcttcgaggacctgatcgcgctggtgtcgctgtac
cgccccggcccgatggacctgatcccggacttcaacgcgcgcaagcacggccagcaggag
atcgtctaccccgatccgcgcaccgaggcgatcctgaaagacacctacggcatcatggtg
taccaggaacaggtgatgcagatggcgcagatcgtcggcgcctactcgctgggcggcgcc
gacctgctgcgccgcgcgatgggcaagaaggtgccggcggagatggccaagcatcgcgag
atcttccgcgagggtgcggccaagggcggcgtcggccaggccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcg
ctggtcagctaccagaccgcgtggctgaaacggcactacccggccgagttcatggccgcc
accctgtcctcggacatggacaataccgacaaggtggtcggcttcctcgacgaggtgcgc
aatctcggcctgagcgtgctgccgccgcggctcaacgcctcggcgtacatgttcgccgcg
gccaccgcggacaccatccagtacggcctgggcgcaatcaagggtgtgggccgcggcgcg
tgcgaggcgatcgtggccgagcgcgagcgcggcggcgactacgcctcgctgctggatttc
tgcacgcgtgtggaatcggccaagctcaacaagcgcaccctggaagcgctgatcaacgcc
ggcgcgatggacgggctgggcagcaaccgcgccacactgatgctgcagctgccggaggtg
atgaaggccaccgagcagatggcgcgcgagcgcgcctccgggcagaactcgctgttcggc
ggcgccgacgccagcgccccggcgctgcacctggatctgtcggaaagcaaggaatggccg
ctgggccagttgctgaccggcgagcgcgagacgctgggcttctatctcagcggccatccg
ttcgatcccttccgcgaggaagtgcgcgaactggtcggctgcgacctgagcgcgctggaa
aagatctgcgcgcaatccggcggcggacgcggcggtggcggcgacggcgaaaaacgcgcc
tggcgcccggaaaccagcgcgatcctcgccggccaggtggtcggggtgcggcgcaagggc
gacagccaggtgttcgtgcagctcgaggacggccgcggccgggtcgagtgcagcgcgttc
accgacgccatcgccgagttcggccacctgctcacccgcgaccgcatcctgatcgtcaag
ggcggcgtgcgcgaggacgaattcaacggcggctatgcgctgcgcatccgccagtgctgg
gactacgaacagatctgcacccaccacgcgcagcgcctgtcgctgcgcctggacctgcgc
cagcgcagcacctggccgcgcatcgacgcgctgctggcgcgccaccgccccggcaagacg
ccgctgcgcctggacctgctgctgcagtccgaacaaggcgccgtggccggcatgctcgac
ctcaacggcagccattcggtgcgcgtggacccacagctgctggacaccctgcgcgccgat
ccgggcgtgtgcgcggtgaaggtgaaatacagcccgccgtgggcgtag
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