Xanthomonas translucens pv. undulosa: FD63_00550
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Entry
FD63_00550 CDS
T03961
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FD63_00550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_00550
Enzymes [BR:
xtn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FD63_00550
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FD63_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AKK66088
LinkDB
All DBs
Position
126544..129957
Genome browser
AA seq
1137 aa
AA seq
DB search
MHAPSAPDFRLYPSNALDTLAALLAEELRRPVPEQPLLVPEVVLIPQVAMRRWLQSTLAA
AHGVAANLEFLTPGEFVARALDANLGPAADDLDMATTQWRLYAALQADPGSDAALAPLAG
YLADGDALKPWALAGELGNVFEKYQAWRRDWLLRWESGADADDPQARLWRRIASGRQYRA
RRIGQYLDRYAQPDGPLPQGLPTRLFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQG
YWGDLQTLWQRRREDGAVDLFAAQVQENPLLQALGTAGRDFMALLGDYEVVHPLAEIAVY
ADPLASGQRPLAAGGLGDSLLRRMQSDLFHRRAPAVPPPLPQVDLVDPSLQLHACHTRLR
ELQVLHDQLRALLDDPRFDPPLQPREIAVLSPDIDPYAPYLEAVFGGHGRDDALPYALAD
ASPLASEPLAEVFLSLLGLPLSRFGLHEILDLLASAPIAEAAGLDETGLERLRGWLQAAG
ARWGLDAVHRHQHQAPADDAYTWRFALDRLLLGHASGAEDDIAGVAPWPQLEGSALAALD
TLLRLLRVLDRHQAMLAEPMAPADWRECLLGLLDALIPQAPSAPRAQRALERLRTLIDQF
ARDAARADYAGKVPAEVVRAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRVICLLG
MNDGDFPRRDPAAGLNRLTAELGSARRRRGDRSTREDDRFLFLQLFASAQDVFYLSYLGA
DARDGGVREPSVLVSELLASAAQYHADPKAIDKLVVRHPLQPFAAAAFGALGEDGADPRR
FSYRRQWRPAVDSLAGQCQSLAPWVAAALPADAAALQTSVSIDDLRRLFVDPAGQFLRHR
LGMRLPDPAGEDSDLEPLLAPGSGLVQYGLQQQVLEAVLSDNTDGLYARLRARALLPSGP
LGRRQLDERLRQLRPYAQAFAQWRGDAPAQSQRLQVRIDGIELHGRLPGWYASGVGRVQI
GALGGRAAIRHGLEWLMLRAAGERADYVRFFEDDDSLGPHPMQGDAAEPLPQAQAQAALA
DLLRLYRYGLQAPLAFAPYSGWTYHQAARNDDLDKAIKDAAAQWQASFGWSEAATPELRL
VHRGRDPFADAQRFAEFAATSHTLYSLLERGSADTTLDPARLAESWRQWRGAQEDAE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccccttccgcgcccgatttccgcctgtacccctccaacgcgctggataccctg
gccgccctgctcgccgaggaactgcgccggccggtgccggagcagccgttgctggtgccg
gaggtggtgctgatcccgcaggtggcgatgcggcgctggctgcagtccacgctggcggcc
gcgcacggcgtcgccgcgaatctggaattcctgacgcccggcgaattcgtcgcgcgcgcg
ctggacgccaacctcggcccggccgccgacgatctggacatggccaccacgcagtggcgg
ctgtacgcggcattgcaggccgatcccggcagcgatgcggcgctggcaccgctggccggc
tacctggccgatggcgacgcgctcaaaccctgggcgctggccggcgagctgggcaacgtg
ttcgaaaaataccaggcctggcgccgcgactggctgctgcgctgggaaagcggcgccgat
gccgacgatccgcaggcgcggctgtggcgccggatcgccagcggccgccagtaccgcgcg
cgccgcatcggccagtatctggaccgctacgcgcagcccgacggcccgctgccgcaaggc
ctgccgacgcggctgttcgccttcgccatcctcaacatctcgcccgacgtactgcgcgtc
ctcgccactcaggcgcgcgtgggcacgctgcacttctacctgcccacgccgacccagggc
tactggggcgacctgcagacgctgtggcagcgccgtcgcgaggatggcgcggtcgacctg
ttcgccgcgcaggtgcaggaaaacccgctgctgcaggccttgggcacggccgggcgcgac
ttcatggcgctgctcggcgattacgaagtggtgcatccgctggccgagatcgcggtctac
gccgatccgctggcctccggccagcgcccgctcgccgccggcggcctcggcgacagcctg
ctgcggcgcatgcagagcgacctgttccatcgccgcgcgccggccgtgccgccaccgttg
ccgcaggtggatctggtcgatcccagcctgcaactgcacgcctgccatacccgcctgcgc
gaactgcaggtgctgcacgaccagctgcgcgcgctgctcgacgacccgcgtttcgatccg
ccgctgcagccgcgcgagatcgcggtgctttcgccggacatcgacccgtacgcgccttac
ctggaggcggtgttcgggggccatggccgcgacgacgcgctgccctacgcgctggccgac
gccagcccgttggccagcgagccgctggccgaagtgttcctgagcctgctcggcctgccg
ctgtcgcgcttcggcctgcacgagatcctcgacctgctggccagcgcgccgatcgccgag
gcggccgggctggacgaaaccgggctggaacgcctgcgcggctggctgcaagccgccggc
gcgcgctggggcctggatgccgtgcatcggcaccagcaccaggcccctgccgacgacgcc
tacacctggcgcttcgcgctggaccggctgctgctcggccacgccagcggtgccgaggac
gatatcgccggcgtggcgccatggccgcagctggaaggcagcgccctggccgcgctggac
acgttgctgcggctgttgcgcgtgctcgaccgccaccaggccatgctggccgagccgatg
gccccggccgactggcgcgaatgcctgctcggcctgctcgatgcgctgatcccgcaagcg
ccgtcggcgccgcgcgcgcaacgcgcgctggaacggctgcgcactctgatcgaccagttc
gcccgcgacgccgcgcgcgccgactacgccggcaaggtgccggccgaggtggtgcgcgcg
catttcgccgcggtgctgggcgaatcggacacgcgcgcgccgctgctcaccggcggcatc
agcttcggccgcatggtgccgatgcgcctgctgccgttccgcgtcatctgcctgctcggc
atgaacgacggcgacttcccgcgccgcgatccggccgccggcctcaaccgcctcaccgcc
gaactgggcagcgcacgccgccgccgcggtgaccgctctacccgcgaggacgaccgcttc
ctgttcctgcaactgttcgcctcggcgcaggacgtgttctacctcagctacctcggcgcc
gatgcgcgcgacggcggcgtgcgcgagccgtcggtgctggtcagcgaactgctggcgagc
gcggcgcagtaccacgccgacccgaaggccatcgacaagctcgtggtgcgccacccgctg
caacccttcgccgccgccgcgttcggcgcgcttggcgaagacggcgccgatccgcgccgc
ttcagctatcgccggcaatggcggccggcggtggacagcctggccgggcagtgccagtcg
ctggcgccgtgggtggccgcagcgttgccggccgacgccgcggcgctgcaaacgagcgtc
tcgatcgacgacctgcggcgcctgttcgtcgacccggccgggcagttcctgcgccatcgc
ttgggcatgcgcctgcccgacccggccggcgaggacagcgacctggagccattgctggcg
ccgggtagcggcctggtccagtacggcttgcagcaacaggtgctggaggccgtgctgagc
gacaacaccgatggcctgtacgcacgcctgcgcgcccgcgcgctgctgccgtccgggccg
ttgggccggcgccagctcgacgagcgcctgcgccagctgcgcccgtatgcgcaggcgttc
gcgcagtggcgcggcgacgcgccggcgcagtcgcaacggttgcaggtgcggatcgacggc
atcgagctgcatggccgcctgcccggctggtacgcaagcggcgtggggcgggtgcagatc
ggcgcgctcggcggccgcgcggcgatccgccacggcctggaatggctgatgctgcgcgcg
gccggcgaacgcgcggactatgtgcgcttcttcgaagacgacgacagtcttggcccgcat
ccgatgcagggcgacgcggccgaaccgctgccgcaggcgcaggcacaggccgcgctggcc
gacctgctgcggctgtatcggtacggcctgcaggcgccgctggcgttcgccccgtacagc
ggctggacataccaccaggccgcgcgtaacgacgacctcgacaaggcgatcaaggacgcc
gccgcgcaatggcaggccagcttcggctggagcgaagcggccacgccggaactgcgcctg
gtgcaccgcggccgcgacccgttcgccgatgcgcagcgcttcgccgaattcgccgctacc
agccacacgctgtactccctgctcgaacgcggcagcgccgacaccacgctcgatccggcg
cggctggccgagagctggcggcaatggcgcggcgcgcaggaggacgccgaatga
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