KEGG   Xanthomonas translucens pv. undulosa: FD63_00555
Entry
FD63_00555        CDS       T03961                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
xtn  Xanthomonas translucens pv. undulosa
Pathway
xtn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xtn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FD63_00555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtn03400]
    FD63_00555
Enzymes [BR:xtn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FD63_00555
DNA repair and recombination proteins [BR:xtn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FD63_00555
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_22
Other DBs
NCBI-ProteinID: AKK66089
LinkDB
Position
129954..133793
AA seq 1279 aa
MSAAFADDPYLSLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQILAVTFTEAA
TQELRRRIRERLALAATLVPTAASVGAASAATEIPGDLLPTEIAEDPSRLKPLLQDAPDA
ALTRAILAAHLAASDETPAALRRRLQQAVEEIDLGAIFTIHGFCARVLREHALESGQTFA
APELLANDRDLLGEVAADLWRQRAADAAMAEDLVALWPGGPDALASDLRQLVRHPQLLPA
APALADDVATATQQVQDAAAALANAFHAHGTAFFEAIAAAIEEGVLSKVSYKPEWLASLW
HWCESFAATPAAGLPPHAKLIKLTTAELASGTNKKFVGRTPASPMIHEIDGYLAALARLE
EARARRRIRLLHALRGDAVKRLALRKRQRRVQTYDDLVDGVAHALRPDSPQAEALARQLR
AQYVIALVDEFQDTDDRQWSIFSNVFGEGALAREAKLEPALFVIGDPKQAIYGFRGGDVQ
TYLAAAASAEPAPPLGHNFRSRPALLAAIDALYAQAGYAQAFLTEGIAFHPVQPGSKRHD
AELQRDGATAPALTLWRAPQPPPPPAASAAKNTSAGKPKPWSAGRARALCTAACVSAIRD
WLAGGRAGTATLSGRAVQAGDIAVLVRSHGEATRIQQALGAVGIPAVAAGRQSLFATDEA
LELLTLLQALLDPGDDSRLRAALATVLIGEDAAAIAALEHNGDRHRSWQQHALDWRERWQ
RGGPLALIGDLGAAYAQRLLALADGERRLTNYLQLAETLQEADTRALGAHGLVDWLSRRI
ANADDNDETQQLRLESDARRVQIVTLHKSKGLEYPLVFLPYVGIGRSERGAGRHCVVHAP
PLGRQLHWNTSKWSGGNDDPAWSAAEAAWKQEQRAEDARLLYVGLTRAEHALWIATGPFH
QHERTALAAMVGDLDALQAAAGAAAIAIDTTPPPTTPPRLPLADAIQVPPARVAQRHVVP
EWWVYSFTQLANADAGAAADPMASATVVGSGGSDEPSTSEAVATTLDVEAFDRRFTGNRF
GVAMHDVFERCDFAAWRDWVPGQPAPDGQTAAIVESLQRGGYAQDELDDGAAMLTALVGH
TLTVALPEGTRLAAVPAPQRRNEMEFHFAMRPTRVDALLALLHRFGVVGERQAFGARQRL
EGLMTGLIDLTYQHDGRWYVLDYKSNRLPSYDPDALARAMAHSEYALQALIYTVALHRWL
RFRLGETYAYARDFGGVRYLFCRGLDATRDPSPGVHAWRFDPELVESLDALFAGTALEPL
SHQERGWGEGTSAHGAPIP
NT seq 3840 nt   +upstreamnt  +downstreamnt
atgagcgccgccttcgccgacgacccgtacctgagcctgccgctgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagaccttcaccctggccacgctgttcacccggctg
gtggtcgagcgcggcctgcgcatcggccagatcctggcggtcaccttcaccgaagccgcc
acccaggaactgcgccggcgcatccgcgagcggctggcgctcgcagcgacgctggtgccc
acggctgcttctgtaggagcggcttcagccgcgacagaaatcccaggcgacctgctgccg
accgagatcgccgaggacccgtcgcggctgaagccgctcctacaggacgcgccggacgcc
gcactcacccgcgccatcctcgccgcgcacttggccgccagcgacgaaacccccgccgcc
ctgcgccgtcgcctgcaacaagcggtggaggaaatcgacctcggcgccatcttcaccatc
cacggcttctgcgcgcgcgttctgcgcgagcacgcgctggagagcggccagaccttcgcc
gcgccggaactgctggccaacgaccgcgacctgctcggcgaagtcgccgccgacctgtgg
cgccagcgcgccgccgacgcggcgatggccgaagatctggtcgcgctatggccgggtgga
ccggacgcgctggccagcgacctgcgccaattggtgcggcatccacagctgctgccggcg
gcaccggcactggccgacgatgtcgccacggccacgcagcaggtgcaggacgcggccgcc
gcgctcgccaacgcgttccacgcgcacggcaccgcatttttcgaagcgatcgccgccgcc
atcgaagaaggcgtgctgagcaaggttagctacaagccggaatggctggcgtcgctctgg
cattggtgcgaaagcttcgccgccacgcctgcggctggcctccctccgcacgccaagctg
atcaagcttacaacagcggaactagcgtccggcaccaacaagaaattcgtcgggcgcacg
ccggcctcgccgatgatccacgagatcgatggctatctggcggcactggcgcgattggag
gaagcgcgcgccaggcgccgcatccgcctgctgcacgcgctgcgcggcgacgcggtgaag
cggctggccttgcgcaagcgccagcgccgcgtgcagacctacgacgacctggtcgatggc
gtcgcgcacgcattgcggcccgacagtccgcaagccgaagcgctcgcgcggcagctgcgc
gcgcaatacgtcatcgcgctggtggacgaattccaggacaccgacgaccgccagtggtcg
atcttctccaacgtgttcggcgaaggcgcgctggcgcgcgaggcgaagctggaaccggcg
ctgttcgtgatcggcgatcccaagcaggcgatctacggcttccgcggcggcgatgtgcag
acctatctggccgcggccgccagcgccgaaccggcgccgccgctgggccacaacttccgc
tcgcgccccgcgctgctggcggcgatcgacgcgctgtacgcgcaggccggctacgcgcag
gcgttcctgaccgagggcatcgccttccatccggtgcagccgggcagcaagcgccacgac
gccgagctgcagcgcgatggcgccaccgccccggcgctgaccctgtggcgcgcgccgcaa
ccgccgccgccgccggccgcgtctgcggccaaaaacacatccgcaggcaagcccaaaccc
tggagcgccggccgcgcgcgcgcgctgtgcactgccgcctgcgtctccgcgattcgcgac
tggctggccggcggccgcgccggcaccgcgacgcttagcggccgcgcggtgcaggccggc
gatatcgcggtgctggtgcgcagccatggcgaggccacccgcatccagcaggcgctgggc
gcggtcggcattcccgcggtggccgccggcaggcagagcctgttcgccaccgatgaagca
ctggaactgctgaccctgctgcaggcgctgctcgacccgggcgacgacagccgcctgcgc
gcggcgctggcgacggtgctgatcggcgaggacgccgccgcgatcgccgcgctcgaacac
aacggcgaccgtcaccgcagttggcagcaacatgcgctggactggcgcgagcgctggcag
cgcggcgggccactggccttgatcggcgacctcggcgccgcgtacgcgcagcgcctgctg
gcgctggcagacggcgagcgccgcctgaccaactacctgcagctggccgaaacactgcag
gaagccgacacccgcgcgctcggtgcgcacggactggtcgattggctgtcgcggcgcatc
gccaatgccgacgacaacgacgagacccagcagctgcgcctggaatcggacgcgcgccgg
gtgcagatcgtgaccctgcacaagagcaagggcctggagtatccgctggtgttcctgccc
tacgtcggcatcggccgcagcgagcgcggcgccggccgccactgcgtcgtgcacgcgccg
ccgctcggccgccaactgcactggaacacgtcgaaatggagcggcggcaacgacgaccct
gcctggagcgcggccgaggcggcgtggaaacaggaacagcgcgccgaggacgcgcgcctg
ctctacgtcggcctgacccgtgccgagcacgcgctgtggatcgccaccggtccgttccac
cagcacgagcgcaccgcgctggcggcgatggtcggcgacctggacgcgttgcaggccgcc
gccggcgccgccgccatcgccatcgacaccaccccgccgccaaccaccccgccgcgcctg
ccgttggccgacgccatccaggtgccgccggcgcgcgtggcgcagcggcatgtcgtgccg
gagtggtgggtgtacagcttcacccagctggccaatgccgatgccggcgccgccgccgac
ccgatggccagcgccaccgtggtcggcagcggcggcagcgacgagccctccaccagcgaa
gcggtcgccacgacgctggacgtggaagccttcgaccgccgcttcaccggcaaccgcttc
ggcgtggccatgcacgacgtgttcgaacgttgcgacttcgccgcctggcgcgattgggtg
cccggccaaccggcacccgacgggcagaccgcggcgatcgtcgaatccctgcagcgcggc
ggctacgcccaggacgaactggacgacggcgccgccatgctcaccgccctggtcggccac
accctgaccgtcgccttgcccgaaggcacccgcctggccgcggtgcccgcaccgcagcgc
cgcaacgaaatggaattccacttcgccatgcggcctacccgggtcgatgcgctgctggcg
ctgctgcaccgcttcggcgtggtcggcgagcgccaggccttcggcgcgcgccagcgcctg
gaagggctgatgaccggcctgatcgatctcacctaccagcacgacgggcgctggtacgtg
ctcgactacaaatccaaccgcctgcccagctacgaccccgacgcgttggcgagggcgatg
gcgcacagcgaatacgcactgcaggcgctgatctacaccgtcgcgctgcaccgctggctg
cgtttccgcctcggcgaaacatacgcctacgcccgcgacttcggcggcgtgcgctacctg
ttctgccgtggcctcgacgccacccgcgacccctcgccgggcgtccacgcctggcgcttc
gaccccgagctggtcgagtccctggacgcactctttgccggcaccgctctagagcccctt
tcccaccaggagaggggttggggtgagggtacgtccgcccacggagcccccatcccgtga

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