Xanthomonas translucens pv. undulosa: FD63_00555
Help
Entry
FD63_00555 CDS
T03961
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FD63_00555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtn03400
]
FD63_00555
Enzymes [BR:
xtn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FD63_00555
DNA repair and recombination proteins [BR:
xtn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FD63_00555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKK66089
LinkDB
All DBs
Position
129954..133793
Genome browser
AA seq
1279 aa
AA seq
DB search
MSAAFADDPYLSLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQILAVTFTEAA
TQELRRRIRERLALAATLVPTAASVGAASAATEIPGDLLPTEIAEDPSRLKPLLQDAPDA
ALTRAILAAHLAASDETPAALRRRLQQAVEEIDLGAIFTIHGFCARVLREHALESGQTFA
APELLANDRDLLGEVAADLWRQRAADAAMAEDLVALWPGGPDALASDLRQLVRHPQLLPA
APALADDVATATQQVQDAAAALANAFHAHGTAFFEAIAAAIEEGVLSKVSYKPEWLASLW
HWCESFAATPAAGLPPHAKLIKLTTAELASGTNKKFVGRTPASPMIHEIDGYLAALARLE
EARARRRIRLLHALRGDAVKRLALRKRQRRVQTYDDLVDGVAHALRPDSPQAEALARQLR
AQYVIALVDEFQDTDDRQWSIFSNVFGEGALAREAKLEPALFVIGDPKQAIYGFRGGDVQ
TYLAAAASAEPAPPLGHNFRSRPALLAAIDALYAQAGYAQAFLTEGIAFHPVQPGSKRHD
AELQRDGATAPALTLWRAPQPPPPPAASAAKNTSAGKPKPWSAGRARALCTAACVSAIRD
WLAGGRAGTATLSGRAVQAGDIAVLVRSHGEATRIQQALGAVGIPAVAAGRQSLFATDEA
LELLTLLQALLDPGDDSRLRAALATVLIGEDAAAIAALEHNGDRHRSWQQHALDWRERWQ
RGGPLALIGDLGAAYAQRLLALADGERRLTNYLQLAETLQEADTRALGAHGLVDWLSRRI
ANADDNDETQQLRLESDARRVQIVTLHKSKGLEYPLVFLPYVGIGRSERGAGRHCVVHAP
PLGRQLHWNTSKWSGGNDDPAWSAAEAAWKQEQRAEDARLLYVGLTRAEHALWIATGPFH
QHERTALAAMVGDLDALQAAAGAAAIAIDTTPPPTTPPRLPLADAIQVPPARVAQRHVVP
EWWVYSFTQLANADAGAAADPMASATVVGSGGSDEPSTSEAVATTLDVEAFDRRFTGNRF
GVAMHDVFERCDFAAWRDWVPGQPAPDGQTAAIVESLQRGGYAQDELDDGAAMLTALVGH
TLTVALPEGTRLAAVPAPQRRNEMEFHFAMRPTRVDALLALLHRFGVVGERQAFGARQRL
EGLMTGLIDLTYQHDGRWYVLDYKSNRLPSYDPDALARAMAHSEYALQALIYTVALHRWL
RFRLGETYAYARDFGGVRYLFCRGLDATRDPSPGVHAWRFDPELVESLDALFAGTALEPL
SHQERGWGEGTSAHGAPIP
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccttcgccgacgacccgtacctgagcctgccgctgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagaccttcaccctggccacgctgttcacccggctg
gtggtcgagcgcggcctgcgcatcggccagatcctggcggtcaccttcaccgaagccgcc
acccaggaactgcgccggcgcatccgcgagcggctggcgctcgcagcgacgctggtgccc
acggctgcttctgtaggagcggcttcagccgcgacagaaatcccaggcgacctgctgccg
accgagatcgccgaggacccgtcgcggctgaagccgctcctacaggacgcgccggacgcc
gcactcacccgcgccatcctcgccgcgcacttggccgccagcgacgaaacccccgccgcc
ctgcgccgtcgcctgcaacaagcggtggaggaaatcgacctcggcgccatcttcaccatc
cacggcttctgcgcgcgcgttctgcgcgagcacgcgctggagagcggccagaccttcgcc
gcgccggaactgctggccaacgaccgcgacctgctcggcgaagtcgccgccgacctgtgg
cgccagcgcgccgccgacgcggcgatggccgaagatctggtcgcgctatggccgggtgga
ccggacgcgctggccagcgacctgcgccaattggtgcggcatccacagctgctgccggcg
gcaccggcactggccgacgatgtcgccacggccacgcagcaggtgcaggacgcggccgcc
gcgctcgccaacgcgttccacgcgcacggcaccgcatttttcgaagcgatcgccgccgcc
atcgaagaaggcgtgctgagcaaggttagctacaagccggaatggctggcgtcgctctgg
cattggtgcgaaagcttcgccgccacgcctgcggctggcctccctccgcacgccaagctg
atcaagcttacaacagcggaactagcgtccggcaccaacaagaaattcgtcgggcgcacg
ccggcctcgccgatgatccacgagatcgatggctatctggcggcactggcgcgattggag
gaagcgcgcgccaggcgccgcatccgcctgctgcacgcgctgcgcggcgacgcggtgaag
cggctggccttgcgcaagcgccagcgccgcgtgcagacctacgacgacctggtcgatggc
gtcgcgcacgcattgcggcccgacagtccgcaagccgaagcgctcgcgcggcagctgcgc
gcgcaatacgtcatcgcgctggtggacgaattccaggacaccgacgaccgccagtggtcg
atcttctccaacgtgttcggcgaaggcgcgctggcgcgcgaggcgaagctggaaccggcg
ctgttcgtgatcggcgatcccaagcaggcgatctacggcttccgcggcggcgatgtgcag
acctatctggccgcggccgccagcgccgaaccggcgccgccgctgggccacaacttccgc
tcgcgccccgcgctgctggcggcgatcgacgcgctgtacgcgcaggccggctacgcgcag
gcgttcctgaccgagggcatcgccttccatccggtgcagccgggcagcaagcgccacgac
gccgagctgcagcgcgatggcgccaccgccccggcgctgaccctgtggcgcgcgccgcaa
ccgccgccgccgccggccgcgtctgcggccaaaaacacatccgcaggcaagcccaaaccc
tggagcgccggccgcgcgcgcgcgctgtgcactgccgcctgcgtctccgcgattcgcgac
tggctggccggcggccgcgccggcaccgcgacgcttagcggccgcgcggtgcaggccggc
gatatcgcggtgctggtgcgcagccatggcgaggccacccgcatccagcaggcgctgggc
gcggtcggcattcccgcggtggccgccggcaggcagagcctgttcgccaccgatgaagca
ctggaactgctgaccctgctgcaggcgctgctcgacccgggcgacgacagccgcctgcgc
gcggcgctggcgacggtgctgatcggcgaggacgccgccgcgatcgccgcgctcgaacac
aacggcgaccgtcaccgcagttggcagcaacatgcgctggactggcgcgagcgctggcag
cgcggcgggccactggccttgatcggcgacctcggcgccgcgtacgcgcagcgcctgctg
gcgctggcagacggcgagcgccgcctgaccaactacctgcagctggccgaaacactgcag
gaagccgacacccgcgcgctcggtgcgcacggactggtcgattggctgtcgcggcgcatc
gccaatgccgacgacaacgacgagacccagcagctgcgcctggaatcggacgcgcgccgg
gtgcagatcgtgaccctgcacaagagcaagggcctggagtatccgctggtgttcctgccc
tacgtcggcatcggccgcagcgagcgcggcgccggccgccactgcgtcgtgcacgcgccg
ccgctcggccgccaactgcactggaacacgtcgaaatggagcggcggcaacgacgaccct
gcctggagcgcggccgaggcggcgtggaaacaggaacagcgcgccgaggacgcgcgcctg
ctctacgtcggcctgacccgtgccgagcacgcgctgtggatcgccaccggtccgttccac
cagcacgagcgcaccgcgctggcggcgatggtcggcgacctggacgcgttgcaggccgcc
gccggcgccgccgccatcgccatcgacaccaccccgccgccaaccaccccgccgcgcctg
ccgttggccgacgccatccaggtgccgccggcgcgcgtggcgcagcggcatgtcgtgccg
gagtggtgggtgtacagcttcacccagctggccaatgccgatgccggcgccgccgccgac
ccgatggccagcgccaccgtggtcggcagcggcggcagcgacgagccctccaccagcgaa
gcggtcgccacgacgctggacgtggaagccttcgaccgccgcttcaccggcaaccgcttc
ggcgtggccatgcacgacgtgttcgaacgttgcgacttcgccgcctggcgcgattgggtg
cccggccaaccggcacccgacgggcagaccgcggcgatcgtcgaatccctgcagcgcggc
ggctacgcccaggacgaactggacgacggcgccgccatgctcaccgccctggtcggccac
accctgaccgtcgccttgcccgaaggcacccgcctggccgcggtgcccgcaccgcagcgc
cgcaacgaaatggaattccacttcgccatgcggcctacccgggtcgatgcgctgctggcg
ctgctgcaccgcttcggcgtggtcggcgagcgccaggccttcggcgcgcgccagcgcctg
gaagggctgatgaccggcctgatcgatctcacctaccagcacgacgggcgctggtacgtg
ctcgactacaaatccaaccgcctgcccagctacgaccccgacgcgttggcgagggcgatg
gcgcacagcgaatacgcactgcaggcgctgatctacaccgtcgcgctgcaccgctggctg
cgtttccgcctcggcgaaacatacgcctacgcccgcgacttcggcggcgtgcgctacctg
ttctgccgtggcctcgacgccacccgcgacccctcgccgggcgtccacgcctggcgcttc
gaccccgagctggtcgagtccctggacgcactctttgccggcaccgctctagagcccctt
tcccaccaggagaggggttggggtgagggtacgtccgcccacggagcccccatcccgtga
DBGET
integrated database retrieval system