Xanthomonas translucens pv. undulosa: FD63_02325
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Entry
FD63_02325 CDS
T03961
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FD63_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtn03021
]
FD63_02325
03019 Messenger RNA biogenesis [BR:
xtn03019
]
FD63_02325
Transcription machinery [BR:
xtn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FD63_02325
Messenger RNA biogenesis [BR:
xtn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FD63_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
Spore_III_AA
OB_RNB
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AKK66399
LinkDB
All DBs
Position
complement(537302..539122)
Genome browser
AA seq
606 aa
AA seq
DB search
MSDHTITEPGSVDAPAEKRARKPRVSKPVSGAEGGAEHGAPAQPNLPLNPAPAQADAPRA
APQQERQERAAPQEHAQAASQQPQSQPAPASGGDAQGQGGGNQNDGGEPREGGNPRFNNQ
NPQNQNNQNNQQGNRRDRFRNRRDRDRGGSGGGGGGRFPDNGLPNDTGANEVFVPRPHAN
VPEGFPIYSLSDLKRMPAQKLLDIAEQLNIQDGVARARKQDVIFALLKVLTRHGEGVAAD
GVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRIRFPKDGERYFA
LSIVDTINGEPLEASKNKVLFENLTALFPRKRFTLERGNGSSEDISGRILDLMAPQGKGQ
RALIVSPPKAGKTMLMQQVATAITTNHPDVHMIVLLIDERPEEVTEMQRTVRGEVISSTF
DEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDAN
ALHRPKRFFGAARNVEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNSEVHLNRRIAEK
RVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEIAAMEFLLDKMKNTKSNDEF
FGSMKR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatcacaccattaccgaacccgggagcgtcgatgcccccgccgagaagcgcgcg
cgcaagccgcgtgtcagcaagcccgtcagcggcgctgaaggcggagcggagcatggcgca
cctgcgcagccgaacctgccgctgaacccggcaccggcccaggccgacgcgccccgtgcc
gcaccccagcaggaacgacaggaacgcgccgcgccgcaggaacacgcgcaggccgcatcg
cagcagccccagtcccagcccgcccccgcttccggcggcgatgcccagggccagggcggc
ggcaaccagaacgacggcggcgagccgcgcgaaggcggcaacccgcgcttcaacaaccag
aatccgcagaaccagaacaatcagaacaaccagcagggcaatcgccgcgaccgcttccgc
aatcgccgcgatcgcgatcgcgggggcagtggtggcggtggcggcggtcgcttcccggac
aatggcctgcccaacgacaccggcgccaacgaggtgttcgtgccgcgtccgcatgccaac
gtgccggaaggcttcccgatctactcgctgagcgacctgaagcggatgccggcgcagaag
ctgctggacatcgccgagcagctcaacatccaggacggcgtggcccgcgcgcgcaagcag
gacgtgatcttcgcgctgctgaaggtgctcacccgccatggcgaaggcgtcgccgccgac
ggcgtgctggaaatcctgccggacggcttcggcttcctgcgcgcggccgaggccagctac
ctggccggcccggacgacacctacatctcgcccagccagatccgccgctttaacctgcgc
accggcgaccacctgtccggccgcatccgcttcccgaaggacggcgaacgctatttcgcg
ctgtcgatcgtcgacacgatcaacggcgagccgctggaagcgagcaagaacaaggtgctg
ttcgagaacctgaccgcgctgttcccgcgcaagcgcttcaccctggaacgcggcaacggt
tcctcagaagacatctccgggcgcatcctcgacctgatggcgccgcagggcaagggccag
cgcgcgctgatcgtatccccgcccaaggccggcaagaccatgctgatgcagcaagtggcc
acggcgatcaccaccaaccatcccgacgtgcacatgatcgtgctgctgatcgacgagcgg
ccggaagaagtgaccgaaatgcagcgcaccgtgcgcggcgaggtcatctcctccaccttc
gacgagccggccgcgcgccacgtgcaggtcgccgagatggtgatagagcgcgccaagcgc
ctggtcgagcacaagaaggacgtggtgatcctgctcgactcgatcacccgcctggcccgc
gcctacaacaacgtggtgccgtcctccggcaaggtgctcagcggcggcgtggacgccaac
gcgctgcaccgcccgaagcgtttcttcggcgcggcccgtaacgtcgaagaaggcggctcg
ctgaccatcatcgccaccgcgctggtggaaaccggcagcaagatggacgaggtgatctac
gaggagttcaagggcaccggcaacagcgaagtgcacctgaaccgccgtatcgccgagaag
cgcgtgtacccggcgatcgacatcaaccgttccggtacccgccgcgaagacctgctgatc
gagccggagctgctgcagaagatctggatcctgcgcaagctgctgcatccgatggacgag
atcgcggcgatggagttcctgctggacaagatgaagaacaccaagtccaacgacgagttc
ttcgggtcgatgaagcgctga
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