Xanthomonas translucens pv. undulosa: FD63_02530
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Entry
FD63_02530 CDS
T03961
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FD63_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtn03021
]
FD63_02530
Transcription machinery [BR:
xtn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FD63_02530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AKK66436
LinkDB
All DBs
Position
582033..583892
Genome browser
AA seq
619 aa
AA seq
DB search
MANERPAQQSDIKLLISKGLEQGYLTYAEVNDHLPDDLVDPEQIEDIISMINGMGIDVHE
VAPDAETLLLNDGNTGNREVDDTAAEEAAAALTALDTEGGRTTDPVRMYMREMGTVELLT
REGEIAIAKRIEEGLSQVQAALGAFPLAVETLLEDYEQHKEGKKRLAEIVVGFNDLIEEE
PAPAVVASDDDSAADASDDDDDEEVEAAEEEAGPTGPDPAEVARRMELLATEYAKFKKAH
AKNGAEHKLVTKLRTDIAEVFVTLKLPLPLTDVLVRKLRDTMAQVKDHERRVLHLATHVA
RMPRKDFIRSWEGNQTNVAWVDDALKRKQKWSSALRDVKDQIVSEQEATVAVEQATYLSL
TELKEISRAMAYGEAKARKAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKA
VDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQYG
REATPEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDTNVESPIENT
TNINLSETVRDVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKAL
RKLRHPSRSEQLRSFLDID
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaacgtcctgcccagcaatccgacatcaagctactgatcagcaagggcctg
gaacagggctatctgacttacgccgaagtcaatgaccatctgcccgacgacctggtcgat
ccggagcagatcgaagacatcatcagcatgatcaacggcatgggcatcgacgtccatgaa
gtcgcccccgacgccgagaccctgctgctcaacgacggcaacaccggtaaccgcgaagtc
gacgacaccgcggccgaagaagccgccgcggcgctgaccgcgctcgataccgaaggtggc
cgcaccaccgacccggtgcgcatgtacatgcgcgagatgggcacggtcgagctgctgacc
cgcgaaggcgagatcgccatcgccaagcgcatcgaggaaggcctcagccaggtccaggcc
gcgctgggtgcgttcccgctggccgtggaaaccctgctcgaggactacgagcagcacaag
gaaggcaagaagcgcctggccgagatcgtggtcggcttcaacgacctgatcgaggaagag
ccggcgccggccgtggtcgccagcgacgacgacagcgccgccgatgccagcgacgacgat
gacgacgaggaagtcgaagccgccgaggaagaggccggcccgaccggtccggatccggcc
gaggtcgcgcggcgcatggagctgctggccaccgaatacgccaagttcaagaaagcgcat
gccaagaacggcgccgagcacaagctggtcaccaagctgcgcaccgacattgccgaggtg
ttcgtcaccttgaagctgccgctgccgctgaccgacgtgctggtgcgcaagctgcgcgac
accatggcccaggtcaaggaccacgagcgccgcgtgctgcacctggccacccacgtggcg
cggatgccgcgcaaggacttcatccgttcctgggaaggcaaccagaccaacgtggcctgg
gtcgacgacgcactgaagcgcaagcagaagtggtcctcggcgctgcgcgacgtcaaggat
cagatcgtctccgagcaggaagccaccgtggcggtggagcaggcgacctacctgagcctg
accgagctgaaggaaatcagccgcgcgatggcctatggcgaagccaaggcgcgcaaggcc
aagaaggaaatggtcgaggccaacctgcgcctggtgatctcgatcgccaagaagtacacc
aaccgcggcctgcagttcctcgacctgatccaggaaggcaacatcggcctgatgaaggcg
gtggacaagttcgaataccgccgcggctacaagttctccacgtatgcgacctggtggatc
cgccaggccatcacccgttcgatcgccgatcaggcgcgcaccatccgcatcccggtgcac
atgatcgagacgatcaacaagttgaaccgcatttcccggcagatgctccagcagtacggc
cgcgaggccacgccggaggagctggccaaggaaatggacatgccggaggacaagatccgc
aaggtgatgaagatcgccaaggagccgatctcgatggaaaccccgatcggcgatgacgag
gattcgcatctgggcgacttcatcgaggacaccaacgtggagtccccgatcgagaacacc
accaatatcaacctgtccgagaccgtgcgcgacgtgctcgccgggctgaccccgcgcgag
gccaaggtgttgcgcatgcgcttcggcatcgacatgaacaccgaccacaccctcgaggaa
gtcggcaagcagttcgatgtcacgcgcgagcgcatccgccagatagaggccaaggcgctg
cgcaagctgcgtcacccgagccgctccgagcagctgcgcagcttcctcgatatcgactga
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